Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 HCG4-201ENST00000418983 998 ntBASIC17.07■□□□□ 0.32
HLA-DQB2P05538 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 AL139011.1-202ENST00000642063 584 ntBASIC17.07■□□□□ 0.32
HLA-DQB2P05538 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
HLA-DQB2P05538 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQB2P05538 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HLA-DQB2P05538 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.06■□□□□ 0.32
HLA-DQB2P05538 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-DQB2P05538 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQB2P05538 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.06■□□□□ 0.32
HLA-DQB2P05538 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQB2P05538 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.06■□□□□ 0.32
HLA-DQB2P05538 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQB2P05538 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-DQB2P05538 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-DQB2P05538 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
HLA-DQB2P05538 HLA-J-202ENST00000469281 1241 ntBASIC17.06■□□□□ 0.32
HLA-DQB2P05538 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-DQB2P05538 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
HLA-DQB2P05538 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.06■□□□□ 0.32
HLA-DQB2P05538 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQB2P05538 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQB2P05538 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.06■□□□□ 0.32
HLA-DQB2P05538 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-DQB2P05538 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQB2P05538 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQB2P05538 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
HLA-DQB2P05538 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQB2P05538 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.06■□□□□ 0.32
HLA-DQB2P05538 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-DQB2P05538 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HLA-DQB2P05538 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQB2P05538 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQB2P05538 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
HLA-DQB2P05538 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQB2P05538 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DQB2P05538 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HLA-DQB2P05538 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.05■□□□□ 0.32
HLA-DQB2P05538 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
HLA-DQB2P05538 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.05■□□□□ 0.32
HLA-DQB2P05538 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.05■□□□□ 0.32
HLA-DQB2P05538 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQB2P05538 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HLA-DQB2P05538 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.05■□□□□ 0.32
HLA-DQB2P05538 KRT18P2-201ENST00000447938 1258 ntBASIC17.05■□□□□ 0.32
HLA-DQB2P05538 AL513480.1-201ENST00000451731 511 ntBASIC17.05■□□□□ 0.32
HLA-DQB2P05538 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.05■□□□□ 0.32
HLA-DQB2P05538 AC096734.2-201ENST00000562054 433 ntBASIC17.05■□□□□ 0.32
HLA-DQB2P05538 AC106730.1-201ENST00000566722 1090 ntBASIC17.05■□□□□ 0.32
HLA-DQB2P05538 AC018845.2-201ENST00000568326 409 ntBASIC17.05■□□□□ 0.32
HLA-DQB2P05538 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HLA-DQB2P05538 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.05■□□□□ 0.32
HLA-DQB2P05538 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.05■□□□□ 0.32
HLA-DQB2P05538 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.05■□□□□ 0.32
HLA-DQB2P05538 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.05■□□□□ 0.32
HLA-DQB2P05538 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.05■□□□□ 0.32
HLA-DQB2P05538 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQB2P05538 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQB2P05538 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQB2P05538 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQB2P05538 AC012569.1-201ENST00000591191 1524 ntBASIC17.05■□□□□ 0.32
HLA-DQB2P05538 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQB2P05538 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQB2P05538 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DQB2P05538 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQB2P05538 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HLA-DQB2P05538 ZNF259P1-201ENST00000407656 1365 ntBASIC17.04■□□□□ 0.32
HLA-DQB2P05538 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQB2P05538 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQB2P05538 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQB2P05538 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQB2P05538 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQB2P05538 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQB2P05538 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
HLA-DQB2P05538 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.04■□□□□ 0.32
HLA-DQB2P05538 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQB2P05538 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.04■□□□□ 0.32
HLA-DQB2P05538 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
HLA-DQB2P05538 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.04■□□□□ 0.32
HLA-DQB2P05538 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.04■□□□□ 0.32
HLA-DQB2P05538 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.04■□□□□ 0.32
HLA-DQB2P05538 AP001350.2-201ENST00000625104 1094 ntBASIC17.04■□□□□ 0.32
HLA-DQB2P05538 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.04■□□□□ 0.32
HLA-DQB2P05538 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQB2P05538 AL512652.2-201ENST00000625156 1716 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms