Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV3P03979 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV3P03979 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV3P03979 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV3P03979 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.29□□□□□ -0.28
TRGV3P03979 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.29□□□□□ -0.28
TRGV3P03979 PAWRP1-201ENST00000451083 565 ntBASIC13.29□□□□□ -0.28
TRGV3P03979 AC087163.2-201ENST00000457299 853 ntBASIC13.29□□□□□ -0.28
TRGV3P03979 AC108073.2-201ENST00000464002 357 ntBASIC13.29□□□□□ -0.28
TRGV3P03979 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.29□□□□□ -0.28
TRGV3P03979 UNC93B6-202ENST00000528242 690 ntBASIC13.29□□□□□ -0.28
TRGV3P03979 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.29□□□□□ -0.28
TRGV3P03979 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.29□□□□□ -0.28
TRGV3P03979 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV3P03979 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.29□□□□□ -0.28
TRGV3P03979 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.29□□□□□ -0.28
TRGV3P03979 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.29□□□□□ -0.28
TRGV3P03979 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV3P03979 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.29□□□□□ -0.28
TRGV3P03979 TUBB8P12-201ENST00000308911 1335 ntBASIC13.29□□□□□ -0.28
TRGV3P03979 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV3P03979 IL9RP2-201ENST00000423948 1312 ntBASIC13.29□□□□□ -0.28
TRGV3P03979 TUBB7P-202ENST00000428444 1305 ntBASIC13.29□□□□□ -0.28
TRGV3P03979 TUBB8P7-204ENST00000567960 1332 ntBASIC13.29□□□□□ -0.28
TRGV3P03979 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV3P03979 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV3P03979 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV3P03979 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV3P03979 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV3P03979 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV3P03979 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.29□□□□□ -0.28
TRGV3P03979 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRGV3P03979 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.29□□□□□ -0.28
TRGV3P03979 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TRGV3P03979 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV3P03979 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV3P03979 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV3P03979 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV3P03979 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV3P03979 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.28□□□□□ -0.28
TRGV3P03979 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV3P03979 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TRGV3P03979 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.28□□□□□ -0.28
TRGV3P03979 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.28□□□□□ -0.28
TRGV3P03979 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.28□□□□□ -0.28
TRGV3P03979 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.28□□□□□ -0.28
TRGV3P03979 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
TRGV3P03979 AC004790.2-201ENST00000623588 572 ntBASIC13.28□□□□□ -0.28
TRGV3P03979 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV3P03979 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV3P03979 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV3P03979 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
TRGV3P03979 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
TRGV3P03979 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV3P03979 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV3P03979 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV3P03979 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV3P03979 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV3P03979 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV3P03979 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV3P03979 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV3P03979 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV3P03979 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.28□□□□□ -0.28
TRGV3P03979 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV3P03979 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
TRGV3P03979 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV3P03979 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV3P03979 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV3P03979 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV3P03979 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRGV3P03979 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRGV3P03979 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRGV3P03979 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.27□□□□□ -0.28
TRGV3P03979 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.27□□□□□ -0.28
TRGV3P03979 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRGV3P03979 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRGV3P03979 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRGV3P03979 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRGV3P03979 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.27□□□□□ -0.28
TRGV3P03979 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
TRGV3P03979 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRGV3P03979 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC13.27□□□□□ -0.28
TRGV3P03979 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC13.27□□□□□ -0.29
TRGV3P03979 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.27□□□□□ -0.29
TRGV3P03979 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.27□□□□□ -0.29
TRGV3P03979 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.27□□□□□ -0.29
TRGV3P03979 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
TRGV3P03979 RPL13AP23-201ENST00000480739 586 ntBASIC13.27□□□□□ -0.29
TRGV3P03979 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.27□□□□□ -0.29
TRGV3P03979 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRGV3P03979 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
TRGV3P03979 IGHV3-22-201ENST00000520721 359 ntBASIC13.27□□□□□ -0.29
TRGV3P03979 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.27□□□□□ -0.29
TRGV3P03979 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.27□□□□□ -0.29
TRGV3P03979 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.27□□□□□ -0.29
TRGV3P03979 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.27□□□□□ -0.29
TRGV3P03979 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.27□□□□□ -0.29
TRGV3P03979 Z83851.2-201ENST00000609564 659 ntBASIC13.27□□□□□ -0.29
TRGV3P03979 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.27□□□□□ -0.29
TRGV3P03979 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms