Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CNOT4O95628 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CNOT4O95628 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.99□□□□□ -0.01
CNOT4O95628 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CNOT4O95628 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CNOT4O95628 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CNOT4O95628 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.99□□□□□ -0.01
CNOT4O95628 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CNOT4O95628 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CNOT4O95628 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
CNOT4O95628 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.99□□□□□ -0.01
CNOT4O95628 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CNOT4O95628 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CNOT4O95628 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CNOT4O95628 IGLL3P-201ENST00000412472 434 ntBASIC14.99□□□□□ -0.01
CNOT4O95628 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.99□□□□□ -0.01
CNOT4O95628 SLC25A6P2-201ENST00000497974 877 ntBASIC14.99□□□□□ -0.01
CNOT4O95628 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.99□□□□□ -0.01
CNOT4O95628 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.99□□□□□ -0.01
CNOT4O95628 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.99□□□□□ -0.01
CNOT4O95628 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.99□□□□□ -0.01
CNOT4O95628 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.99□□□□□ -0.01
CNOT4O95628 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
CNOT4O95628 AC005412.3-201ENST00000580309 715 ntBASIC14.99□□□□□ -0.01
CNOT4O95628 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.99□□□□□ -0.01
CNOT4O95628 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.99□□□□□ -0.01
CNOT4O95628 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.99□□□□□ -0.01
CNOT4O95628 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.99□□□□□ -0.01
CNOT4O95628 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.99□□□□□ -0.01
CNOT4O95628 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.99□□□□□ -0.01
CNOT4O95628 LINC02012-201ENST00000608206 1725 ntBASIC14.99□□□□□ -0.01
CNOT4O95628 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CNOT4O95628 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CNOT4O95628 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CNOT4O95628 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CNOT4O95628 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CNOT4O95628 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CNOT4O95628 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CNOT4O95628 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.99□□□□□ -0.01
CNOT4O95628 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CNOT4O95628 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CNOT4O95628 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CNOT4O95628 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CNOT4O95628 AL021920.2-201ENST00000624828 1351 ntBASIC14.98□□□□□ -0.01
CNOT4O95628 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
CNOT4O95628 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.98□□□□□ -0.01
CNOT4O95628 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CNOT4O95628 CROCCP2-202ENST00000412962 2773 ntBASIC14.98□□□□□ -0.01
CNOT4O95628 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNOT4O95628 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.98□□□□□ -0.01
CNOT4O95628 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.98□□□□□ -0.01
CNOT4O95628 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNOT4O95628 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CNOT4O95628 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.98□□□□□ -0.01
CNOT4O95628 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNOT4O95628 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.98□□□□□ -0.01
CNOT4O95628 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNOT4O95628 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CNOT4O95628 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNOT4O95628 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CNOT4O95628 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNOT4O95628 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CNOT4O95628 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.98□□□□□ -0.01
CNOT4O95628 AC211486.1-202ENST00000416371 468 ntBASIC14.98□□□□□ -0.01
CNOT4O95628 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.98□□□□□ -0.01
CNOT4O95628 AC211476.1-201ENST00000503899 468 ntBASIC14.98□□□□□ -0.01
CNOT4O95628 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.98□□□□□ -0.01
CNOT4O95628 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.98□□□□□ -0.01
CNOT4O95628 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.98□□□□□ -0.01
CNOT4O95628 AC023141.13-201ENST00000604991 943 ntBASIC14.98□□□□□ -0.01
CNOT4O95628 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.98□□□□□ -0.01
CNOT4O95628 REXO1L3P-201ENST00000622202 1288 ntBASIC14.98□□□□□ -0.01
CNOT4O95628 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CNOT4O95628 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CNOT4O95628 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CNOT4O95628 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNOT4O95628 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNOT4O95628 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNOT4O95628 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNOT4O95628 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CNOT4O95628 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CNOT4O95628 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.97□□□□□ -0.01
CNOT4O95628 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNOT4O95628 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.97□□□□□ -0.01
CNOT4O95628 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CNOT4O95628 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CNOT4O95628 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNOT4O95628 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.97□□□□□ -0.01
CNOT4O95628 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
CNOT4O95628 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNOT4O95628 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNOT4O95628 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNOT4O95628 AL023806.1-201ENST00000603994 1649 ntBASIC14.97□□□□□ -0.01
CNOT4O95628 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNOT4O95628 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CNOT4O95628 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNOT4O95628 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNOT4O95628 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNOT4O95628 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.97□□□□□ -0.01
CNOT4O95628 MCCD1P2-201ENST00000423228 335 ntBASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms