Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE3O75131 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE3O75131 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE3O75131 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
CPNE3O75131 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.22■□□□□ 0.19
CPNE3O75131 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.22■□□□□ 0.19
CPNE3O75131 FAM58CP-201ENST00000435741 640 ntBASIC16.22■□□□□ 0.19
CPNE3O75131 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.22■□□□□ 0.19
CPNE3O75131 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.22■□□□□ 0.19
CPNE3O75131 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
CPNE3O75131 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE3O75131 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE3O75131 AC068137.2-201ENST00000605408 478 ntBASIC16.22■□□□□ 0.19
CPNE3O75131 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.22■□□□□ 0.19
CPNE3O75131 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE3O75131 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.22■□□□□ 0.19
CPNE3O75131 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.22■□□□□ 0.19
CPNE3O75131 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.22■□□□□ 0.19
CPNE3O75131 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE3O75131 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE3O75131 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE3O75131 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.22■□□□□ 0.19
CPNE3O75131 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CPNE3O75131 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE3O75131 AL645608.8-201ENST00000606034 2086 ntBASIC16.22■□□□□ 0.19
CPNE3O75131 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CPNE3O75131 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CPNE3O75131 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE3O75131 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE3O75131 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE3O75131 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE3O75131 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE3O75131 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE3O75131 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.21■□□□□ 0.19
CPNE3O75131 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CPNE3O75131 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CPNE3O75131 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE3O75131 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE3O75131 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CPNE3O75131 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE3O75131 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.21■□□□□ 0.19
CPNE3O75131 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CPNE3O75131 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.21■□□□□ 0.19
CPNE3O75131 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.21■□□□□ 0.19
CPNE3O75131 AL513480.1-201ENST00000451731 511 ntBASIC16.21■□□□□ 0.19
CPNE3O75131 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.21■□□□□ 0.19
CPNE3O75131 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.21■□□□□ 0.19
CPNE3O75131 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.21■□□□□ 0.19
CPNE3O75131 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.21■□□□□ 0.19
CPNE3O75131 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.21■□□□□ 0.19
CPNE3O75131 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CPNE3O75131 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.21■□□□□ 0.19
CPNE3O75131 AL355312.1-201ENST00000407115 2176 ntBASIC16.21■□□□□ 0.19
CPNE3O75131 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE3O75131 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE3O75131 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE3O75131 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE3O75131 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CPNE3O75131 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
CPNE3O75131 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
CPNE3O75131 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CPNE3O75131 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CPNE3O75131 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CPNE3O75131 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE3O75131 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CPNE3O75131 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE3O75131 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.2■□□□□ 0.18
CPNE3O75131 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE3O75131 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.2■□□□□ 0.18
CPNE3O75131 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.2■□□□□ 0.18
CPNE3O75131 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE3O75131 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CPNE3O75131 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.2■□□□□ 0.18
CPNE3O75131 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE3O75131 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE3O75131 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE3O75131 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE3O75131 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CPNE3O75131 CNN2P11-201ENST00000429351 262 ntBASIC16.2■□□□□ 0.18
CPNE3O75131 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.2■□□□□ 0.18
CPNE3O75131 SLC25A6P2-201ENST00000497974 877 ntBASIC16.2■□□□□ 0.18
CPNE3O75131 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.2■□□□□ 0.18
CPNE3O75131 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE3O75131 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
CPNE3O75131 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.2■□□□□ 0.18
CPNE3O75131 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE3O75131 ACTL9-202ENST00000612068 1252 ntBASIC16.2■□□□□ 0.18
CPNE3O75131 AC091812.2-201ENST00000619081 385 ntBASIC16.2■□□□□ 0.18
CPNE3O75131 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE3O75131 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE3O75131 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE3O75131 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE3O75131 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE3O75131 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE3O75131 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE3O75131 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.2■□□□□ 0.18
CPNE3O75131 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CPNE3O75131 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE3O75131 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE3O75131 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms