Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.81■□□□□ 0.28
PHGDHO43175 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PHGDHO43175 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHGDHO43175 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
PHGDHO43175 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHGDHO43175 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHGDHO43175 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHGDHO43175 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHGDHO43175 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHGDHO43175 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.8■□□□□ 0.28
PHGDHO43175 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHGDHO43175 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHGDHO43175 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHGDHO43175 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHGDHO43175 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHGDHO43175 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHGDHO43175 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHGDHO43175 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHGDHO43175 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.8■□□□□ 0.28
PHGDHO43175 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHGDHO43175 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.8■□□□□ 0.28
PHGDHO43175 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHGDHO43175 AC106795.1-205ENST00000512851 1056 ntBASIC16.8■□□□□ 0.28
PHGDHO43175 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHGDHO43175 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.8■□□□□ 0.28
PHGDHO43175 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.8■□□□□ 0.28
PHGDHO43175 NKAPP1-205ENST00000585790 367 ntBASIC16.8■□□□□ 0.28
PHGDHO43175 TERC-201ENST00000602385 541 ntBASIC16.8■□□□□ 0.28
PHGDHO43175 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.8■□□□□ 0.28
PHGDHO43175 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.8■□□□□ 0.28
PHGDHO43175 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PHGDHO43175 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.8■□□□□ 0.28
PHGDHO43175 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHGDHO43175 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHGDHO43175 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PHGDHO43175 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHGDHO43175 LINC00895-201ENST00000629028 1637 ntBASIC16.8■□□□□ 0.28
PHGDHO43175 AC026691.1-201ENST00000602502 2017 ntBASIC16.8■□□□□ 0.28
PHGDHO43175 AL391005.1-201ENST00000623953 2435 ntBASIC16.8■□□□□ 0.28
PHGDHO43175 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHGDHO43175 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PHGDHO43175 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
PHGDHO43175 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHGDHO43175 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHGDHO43175 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PHGDHO43175 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.79■□□□□ 0.28
PHGDHO43175 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHGDHO43175 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHGDHO43175 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PHGDHO43175 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHGDHO43175 KRT8P49-201ENST00000604166 1432 ntBASIC16.79■□□□□ 0.28
PHGDHO43175 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.79■□□□□ 0.28
PHGDHO43175 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHGDHO43175 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHGDHO43175 CICP6-201ENST00000457191 2729 ntBASIC16.79■□□□□ 0.28
PHGDHO43175 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHGDHO43175 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHGDHO43175 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHGDHO43175 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PHGDHO43175 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PHGDHO43175 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.79■□□□□ 0.28
PHGDHO43175 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PHGDHO43175 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PHGDHO43175 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PHGDHO43175 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.79■□□□□ 0.28
PHGDHO43175 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHGDHO43175 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.79■□□□□ 0.28
PHGDHO43175 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.79■□□□□ 0.28
PHGDHO43175 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.79■□□□□ 0.28
PHGDHO43175 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.79■□□□□ 0.28
PHGDHO43175 AL022326.1-202ENST00000641533 845 ntBASIC16.79■□□□□ 0.28
PHGDHO43175 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHGDHO43175 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PHGDHO43175 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
PHGDHO43175 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PHGDHO43175 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHGDHO43175 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.79■□□□□ 0.28
PHGDHO43175 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHGDHO43175 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHGDHO43175 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PHGDHO43175 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHGDHO43175 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHGDHO43175 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHGDHO43175 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PHGDHO43175 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHGDHO43175 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHGDHO43175 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PHGDHO43175 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.79■□□□□ 0.28
PHGDHO43175 NCF1C-201ENST00000438382 1427 ntBASIC16.79■□□□□ 0.28
PHGDHO43175 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHGDHO43175 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PHGDHO43175 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PHGDHO43175 CYP2T1P-202ENST00000641596 2535 ntBASIC16.78■□□□□ 0.28
PHGDHO43175 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PHGDHO43175 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.78■□□□□ 0.28
PHGDHO43175 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.78■□□□□ 0.28
PHGDHO43175 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PHGDHO43175 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.78■□□□□ 0.28
PHGDHO43175 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PHGDHO43175 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms