Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC004233.3-201ENST00000607794 1269 ntBASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 AL662799.1-202ENST00000614205 422 ntBASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 AC025048.6-201ENST00000634326 1161 ntBASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 KRT8P49-201ENST00000604166 1432 ntBASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 AC022144.1-201ENST00000602255 1580 ntBASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 AP3S2-216ENST00000617003 1561 ntBASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CCDC187A0A096LP49 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
CCDC187A0A096LP49 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 OR6D1P-202ENST00000641007 5290 ntBASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 AC073389.1-201ENST00000595595 795 ntBASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 SPDYE12P-201ENST00000618416 771 ntBASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC187A0A096LP49 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC187A0A096LP49 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC187A0A096LP49 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC187A0A096LP49 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC187A0A096LP49 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC187A0A096LP49 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC187A0A096LP49 AC093525.9-201ENST00000624961 1746 ntBASIC15.88■□□□□ 0.13
CCDC187A0A096LP49 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC187A0A096LP49 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC187A0A096LP49 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC187A0A096LP49 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC187A0A096LP49 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC187A0A096LP49 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC187A0A096LP49 TSSK5P-201ENST00000423978 907 ntBASIC15.88■□□□□ 0.13
CCDC187A0A096LP49 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC187A0A096LP49 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC187A0A096LP49 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC187A0A096LP49 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC187A0A096LP49 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.88■□□□□ 0.13
CCDC187A0A096LP49 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC187A0A096LP49 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC187A0A096LP49 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC187A0A096LP49 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC187A0A096LP49 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC187A0A096LP49 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC187A0A096LP49 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC187A0A096LP49 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC187A0A096LP49 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC187A0A096LP49 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC187A0A096LP49 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC187A0A096LP49 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC187A0A096LP49 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC187A0A096LP49 HLA-V-204ENST00000476601 1289 ntBASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms