Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
YIPF1Q9Y548 FO538757.1-201ENST00000623083 1397 ntBASIC17.52■□□□□ 0.39
YIPF1Q9Y548 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
YIPF1Q9Y548 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
YIPF1Q9Y548 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
YIPF1Q9Y548 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
YIPF1Q9Y548 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
YIPF1Q9Y548 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
YIPF1Q9Y548 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
YIPF1Q9Y548 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
YIPF1Q9Y548 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.51■□□□□ 0.39
YIPF1Q9Y548 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
YIPF1Q9Y548 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
YIPF1Q9Y548 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
YIPF1Q9Y548 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
YIPF1Q9Y548 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
YIPF1Q9Y548 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
YIPF1Q9Y548 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
YIPF1Q9Y548 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.51■□□□□ 0.39
YIPF1Q9Y548 BASP1P1-201ENST00000430708 665 ntBASIC17.51■□□□□ 0.39
YIPF1Q9Y548 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.51■□□□□ 0.39
YIPF1Q9Y548 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.51■□□□□ 0.39
YIPF1Q9Y548 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.51■□□□□ 0.39
YIPF1Q9Y548 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.51■□□□□ 0.39
YIPF1Q9Y548 RNA5SP421-201ENST00000516864 134 ntBASIC17.51■□□□□ 0.39
YIPF1Q9Y548 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.51■□□□□ 0.39
YIPF1Q9Y548 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
YIPF1Q9Y548 AJ011932.1-201ENST00000621707 465 ntBASIC17.51■□□□□ 0.39
YIPF1Q9Y548 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
YIPF1Q9Y548 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.51■□□□□ 0.39
YIPF1Q9Y548 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.51■□□□□ 0.39
YIPF1Q9Y548 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
YIPF1Q9Y548 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
YIPF1Q9Y548 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
YIPF1Q9Y548 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
YIPF1Q9Y548 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.51■□□□□ 0.39
YIPF1Q9Y548 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.51■□□□□ 0.39
YIPF1Q9Y548 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
YIPF1Q9Y548 AL671710.1-201ENST00000610245 2349 ntBASIC17.5■□□□□ 0.39
YIPF1Q9Y548 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.5■□□□□ 0.39
YIPF1Q9Y548 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.5■□□□□ 0.39
YIPF1Q9Y548 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
YIPF1Q9Y548 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
YIPF1Q9Y548 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
YIPF1Q9Y548 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
YIPF1Q9Y548 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.5■□□□□ 0.39
YIPF1Q9Y548 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.5■□□□□ 0.39
YIPF1Q9Y548 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.5■□□□□ 0.39
YIPF1Q9Y548 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.5■□□□□ 0.39
YIPF1Q9Y548 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.5■□□□□ 0.39
YIPF1Q9Y548 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
YIPF1Q9Y548 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.5■□□□□ 0.39
YIPF1Q9Y548 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.5■□□□□ 0.39
YIPF1Q9Y548 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
YIPF1Q9Y548 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.5■□□□□ 0.39
YIPF1Q9Y548 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.5■□□□□ 0.39
YIPF1Q9Y548 MIR4745-201ENST00000577608 62 ntBASIC17.5■□□□□ 0.39
YIPF1Q9Y548 AC073389.1-201ENST00000595595 795 ntBASIC17.5■□□□□ 0.39
YIPF1Q9Y548 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
YIPF1Q9Y548 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
YIPF1Q9Y548 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
YIPF1Q9Y548 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
YIPF1Q9Y548 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.5■□□□□ 0.39
YIPF1Q9Y548 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.5■□□□□ 0.39
YIPF1Q9Y548 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
YIPF1Q9Y548 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
YIPF1Q9Y548 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
YIPF1Q9Y548 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
YIPF1Q9Y548 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
YIPF1Q9Y548 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
YIPF1Q9Y548 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
YIPF1Q9Y548 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
YIPF1Q9Y548 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.49■□□□□ 0.39
YIPF1Q9Y548 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
YIPF1Q9Y548 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
YIPF1Q9Y548 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.49■□□□□ 0.39
YIPF1Q9Y548 AC141586.5-201ENST00000624546 2050 ntBASIC17.49■□□□□ 0.39
YIPF1Q9Y548 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
YIPF1Q9Y548 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
YIPF1Q9Y548 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
YIPF1Q9Y548 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
YIPF1Q9Y548 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.49■□□□□ 0.39
YIPF1Q9Y548 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
YIPF1Q9Y548 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
YIPF1Q9Y548 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
YIPF1Q9Y548 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
YIPF1Q9Y548 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
YIPF1Q9Y548 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
YIPF1Q9Y548 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
YIPF1Q9Y548 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.49■□□□□ 0.39
YIPF1Q9Y548 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.49■□□□□ 0.39
YIPF1Q9Y548 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
YIPF1Q9Y548 AL035633.1-201ENST00000406139 838 ntBASIC17.49■□□□□ 0.39
YIPF1Q9Y548 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.49■□□□□ 0.39
YIPF1Q9Y548 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.49■□□□□ 0.39
YIPF1Q9Y548 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
YIPF1Q9Y548 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.49■□□□□ 0.39
YIPF1Q9Y548 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
YIPF1Q9Y548 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.49■□□□□ 0.39
YIPF1Q9Y548 IGHV3-42-201ENST00000520410 361 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms