Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
LRCH1Q9Y2L9 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 C8orf49-201ENST00000525043 1968 ntBASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 KRT8P7-201ENST00000533003 1432 ntBASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 AC005089.1-201ENST00000619486 2241 ntBASIC16.09■□□□□ 0.17
LRCH1Q9Y2L9 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.08■□□□□ 0.17
LRCH1Q9Y2L9 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LRCH1Q9Y2L9 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
LRCH1Q9Y2L9 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LRCH1Q9Y2L9 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRCH1Q9Y2L9 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRCH1Q9Y2L9 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.08■□□□□ 0.17
LRCH1Q9Y2L9 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRCH1Q9Y2L9 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
LRCH1Q9Y2L9 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 AC211429.1-201ENST00000415277 523 ntBASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 AC004951.3-201ENST00000418645 1148 ntBASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 AP000525.1-201ENST00000608286 694 ntBASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
LRCH1Q9Y2L9 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms