Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC21.72■■□□□ 1.07
PDZRN3Q9UPQ7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDZRN3Q9UPQ7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PDZRN3Q9UPQ7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
PDZRN3Q9UPQ7 AL118508.1-201ENST00000613502 2345 ntBASIC21.72■■□□□ 1.07
PDZRN3Q9UPQ7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC21.72■■□□□ 1.07
PDZRN3Q9UPQ7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC21.72■■□□□ 1.07
PDZRN3Q9UPQ7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
PDZRN3Q9UPQ7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDZRN3Q9UPQ7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PDZRN3Q9UPQ7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDZRN3Q9UPQ7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC21.72■■□□□ 1.07
PDZRN3Q9UPQ7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PDZRN3Q9UPQ7 AC023141.5-201ENST00000458585 616 ntBASIC21.72■■□□□ 1.07
PDZRN3Q9UPQ7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC21.72■■□□□ 1.07
PDZRN3Q9UPQ7 CXCL1P1-201ENST00000502804 216 ntBASIC21.72■■□□□ 1.07
PDZRN3Q9UPQ7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PDZRN3Q9UPQ7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC21.72■■□□□ 1.07
PDZRN3Q9UPQ7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC21.72■■□□□ 1.07
PDZRN3Q9UPQ7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PDZRN3Q9UPQ7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PDZRN3Q9UPQ7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDZRN3Q9UPQ7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDZRN3Q9UPQ7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC21.72■■□□□ 1.07
PDZRN3Q9UPQ7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PDZRN3Q9UPQ7 AC097637.2-201ENST00000624096 1997 ntBASIC21.72■■□□□ 1.07
PDZRN3Q9UPQ7 UBALD1-205ENST00000590891 2641 ntBASIC21.72■■□□□ 1.07
PDZRN3Q9UPQ7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PDZRN3Q9UPQ7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PDZRN3Q9UPQ7 TNRC18P3-201ENST00000441896 2691 ntBASIC21.72■■□□□ 1.07
PDZRN3Q9UPQ7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC21.72■■□□□ 1.07
PDZRN3Q9UPQ7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PDZRN3Q9UPQ7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC21.7■■□□□ 1.07
PDZRN3Q9UPQ7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
PDZRN3Q9UPQ7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDZRN3Q9UPQ7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC21.7■■□□□ 1.06
PDZRN3Q9UPQ7 AC009336.1-201ENST00000608941 1553 ntBASIC21.7■■□□□ 1.06
PDZRN3Q9UPQ7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDZRN3Q9UPQ7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDZRN3Q9UPQ7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
PDZRN3Q9UPQ7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDZRN3Q9UPQ7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC21.7■■□□□ 1.06
PDZRN3Q9UPQ7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PDZRN3Q9UPQ7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDZRN3Q9UPQ7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PDZRN3Q9UPQ7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDZRN3Q9UPQ7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDZRN3Q9UPQ7 LINC00982-205ENST00000420957 435 ntBASIC21.7■■□□□ 1.06
PDZRN3Q9UPQ7 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PDZRN3Q9UPQ7 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PDZRN3Q9UPQ7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PDZRN3Q9UPQ7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PDZRN3Q9UPQ7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PDZRN3Q9UPQ7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PDZRN3Q9UPQ7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PDZRN3Q9UPQ7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDZRN3Q9UPQ7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC21.7■■□□□ 1.06
PDZRN3Q9UPQ7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PDZRN3Q9UPQ7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.7■■□□□ 1.06
PDZRN3Q9UPQ7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PDZRN3Q9UPQ7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC21.7■■□□□ 1.06
PDZRN3Q9UPQ7 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC21.7■■□□□ 1.06
PDZRN3Q9UPQ7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDZRN3Q9UPQ7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDZRN3Q9UPQ7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC21.69■■□□□ 1.06
PDZRN3Q9UPQ7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.69■■□□□ 1.06
PDZRN3Q9UPQ7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PDZRN3Q9UPQ7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms