Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGC3Q9UN70 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 HMGA1P7-201ENST00000406908 502 ntBASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 AL031432.2-201ENST00000566714 459 ntBASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 AL928711.1-201ENST00000570165 459 ntBASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 AC064836.3-201ENST00000607928 673 ntBASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 GGT3P-204ENST00000453783 1664 ntBASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PCDHGC3Q9UN70 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 AL031731.1-201ENST00000642131 2094 ntBASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 GGT4P-201ENST00000623672 1708 ntBASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 SLC25A1P1-201ENST00000528351 927 ntBASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 AC106730.1-201ENST00000566722 1090 ntBASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
PCDHGC3Q9UN70 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms