Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
ECHDC1Q9NTX5 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ECHDC1Q9NTX5 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC20.5■□□□□ 0.87
ECHDC1Q9NTX5 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ECHDC1Q9NTX5 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ECHDC1Q9NTX5 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ECHDC1Q9NTX5 MIR940-201ENST00000401276 94 ntBASIC20.5■□□□□ 0.87
ECHDC1Q9NTX5 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.5■□□□□ 0.87
ECHDC1Q9NTX5 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.5■□□□□ 0.87
ECHDC1Q9NTX5 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
ECHDC1Q9NTX5 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ECHDC1Q9NTX5 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ECHDC1Q9NTX5 KRT8P39-201ENST00000396270 1433 ntBASIC20.5■□□□□ 0.87
ECHDC1Q9NTX5 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ECHDC1Q9NTX5 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ECHDC1Q9NTX5 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ECHDC1Q9NTX5 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
ECHDC1Q9NTX5 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.5■□□□□ 0.87
ECHDC1Q9NTX5 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC20.5■□□□□ 0.87
ECHDC1Q9NTX5 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 UBALD1-205ENST00000590891 2641 ntBASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 POLD2P1-201ENST00000511220 997 ntBASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 AL513190.1-201ENST00000621254 727 ntBASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 AC092865.6-201ENST00000642101 219 ntBASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.49■□□□□ 0.87
ECHDC1Q9NTX5 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 GCK-202ENST00000345378 2421 ntTSL 2 BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 SLC9A3P2-201ENST00000447821 2021 ntBASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 FALEC-201ENST00000416894 566 ntTSL 3 BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ECHDC1Q9NTX5 AL512652.2-201ENST00000625156 1716 ntBASIC20.47■□□□□ 0.87
ECHDC1Q9NTX5 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ECHDC1Q9NTX5 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ECHDC1Q9NTX5 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.47■□□□□ 0.87
ECHDC1Q9NTX5 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
ECHDC1Q9NTX5 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ECHDC1Q9NTX5 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ECHDC1Q9NTX5 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms