Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBE2OQ9C0C9 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2OQ9C0C9 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2OQ9C0C9 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2OQ9C0C9 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2OQ9C0C9 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
UBE2OQ9C0C9 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2OQ9C0C9 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.53■□□□□ 0.56
UBE2OQ9C0C9 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
UBE2OQ9C0C9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
UBE2OQ9C0C9 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.53■□□□□ 0.56
UBE2OQ9C0C9 AC022210.1-201ENST00000449856 793 ntBASIC18.53■□□□□ 0.56
UBE2OQ9C0C9 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2OQ9C0C9 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.53■□□□□ 0.56
UBE2OQ9C0C9 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.53■□□□□ 0.56
UBE2OQ9C0C9 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
UBE2OQ9C0C9 AC104794.3-201ENST00000566840 1248 ntBASIC18.53■□□□□ 0.56
UBE2OQ9C0C9 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.53■□□□□ 0.56
UBE2OQ9C0C9 AC106886.1-201ENST00000568660 600 ntBASIC18.53■□□□□ 0.56
UBE2OQ9C0C9 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.53■□□□□ 0.56
UBE2OQ9C0C9 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.53■□□□□ 0.56
UBE2OQ9C0C9 AC003101.2-201ENST00000612557 442 ntBASIC18.53■□□□□ 0.56
UBE2OQ9C0C9 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
UBE2OQ9C0C9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2OQ9C0C9 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2OQ9C0C9 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2OQ9C0C9 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.53■□□□□ 0.56
UBE2OQ9C0C9 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2OQ9C0C9 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2OQ9C0C9 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2OQ9C0C9 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.53■□□□□ 0.56
UBE2OQ9C0C9 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
UBE2OQ9C0C9 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.53■□□□□ 0.56
UBE2OQ9C0C9 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UBE2OQ9C0C9 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBE2OQ9C0C9 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
UBE2OQ9C0C9 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBE2OQ9C0C9 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.52■□□□□ 0.56
UBE2OQ9C0C9 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBE2OQ9C0C9 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UBE2OQ9C0C9 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBE2OQ9C0C9 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.52■□□□□ 0.56
UBE2OQ9C0C9 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBE2OQ9C0C9 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
UBE2OQ9C0C9 MIR346-201ENST00000362234 95 ntBASIC18.52■□□□□ 0.56
UBE2OQ9C0C9 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UBE2OQ9C0C9 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.52■□□□□ 0.56
UBE2OQ9C0C9 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
UBE2OQ9C0C9 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.52■□□□□ 0.56
UBE2OQ9C0C9 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
UBE2OQ9C0C9 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
UBE2OQ9C0C9 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.52■□□□□ 0.56
UBE2OQ9C0C9 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.52■□□□□ 0.56
UBE2OQ9C0C9 AC068587.10-201ENST00000641210 219 ntBASIC18.52■□□□□ 0.56
UBE2OQ9C0C9 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UBE2OQ9C0C9 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
UBE2OQ9C0C9 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.52■□□□□ 0.56
UBE2OQ9C0C9 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
UBE2OQ9C0C9 KRT18P55-202ENST00000578578 1546 ntBASIC18.52■□□□□ 0.56
UBE2OQ9C0C9 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UBE2OQ9C0C9 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UBE2OQ9C0C9 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
UBE2OQ9C0C9 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.52■□□□□ 0.55
UBE2OQ9C0C9 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.52■□□□□ 0.55
UBE2OQ9C0C9 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
UBE2OQ9C0C9 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.52■□□□□ 0.55
UBE2OQ9C0C9 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UBE2OQ9C0C9 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.52■□□□□ 0.55
UBE2OQ9C0C9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UBE2OQ9C0C9 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UBE2OQ9C0C9 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE2OQ9C0C9 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.51■□□□□ 0.55
UBE2OQ9C0C9 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.51■□□□□ 0.55
UBE2OQ9C0C9 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
UBE2OQ9C0C9 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.51■□□□□ 0.55
UBE2OQ9C0C9 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.51■□□□□ 0.55
UBE2OQ9C0C9 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE2OQ9C0C9 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE2OQ9C0C9 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE2OQ9C0C9 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.51■□□□□ 0.55
UBE2OQ9C0C9 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE2OQ9C0C9 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
UBE2OQ9C0C9 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
UBE2OQ9C0C9 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.51■□□□□ 0.55
UBE2OQ9C0C9 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC18.51■□□□□ 0.55
UBE2OQ9C0C9 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBE2OQ9C0C9 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UBE2OQ9C0C9 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18.51■□□□□ 0.55
UBE2OQ9C0C9 AC092552.1-201ENST00000547243 906 ntBASIC18.51■□□□□ 0.55
UBE2OQ9C0C9 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.51■□□□□ 0.55
UBE2OQ9C0C9 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.51■□□□□ 0.55
UBE2OQ9C0C9 AL033527.4-201ENST00000641026 673 ntBASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms