Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 AC007389.4-201ENST00000454674 793 ntBASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 AL844908.2-201ENST00000609461 460 ntBASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 AC018529.1-201ENST00000613063 361 ntBASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
CNTNAP3Q9BZ76 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNTNAP3Q9BZ76 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
CNTNAP3Q9BZ76 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CNTNAP3Q9BZ76 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CNTNAP3Q9BZ76 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CNTNAP3Q9BZ76 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CNTNAP3Q9BZ76 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CNTNAP3Q9BZ76 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNTNAP3Q9BZ76 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNTNAP3Q9BZ76 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CNTNAP3Q9BZ76 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNTNAP3Q9BZ76 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNTNAP3Q9BZ76 PFN1P12-201ENST00000455938 534 ntBASIC16.02■□□□□ 0.16
CNTNAP3Q9BZ76 AC093004.1-201ENST00000508850 424 ntBASIC16.02■□□□□ 0.16
CNTNAP3Q9BZ76 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.02■□□□□ 0.16
CNTNAP3Q9BZ76 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.02■□□□□ 0.16
CNTNAP3Q9BZ76 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.02■□□□□ 0.16
CNTNAP3Q9BZ76 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.02■□□□□ 0.16
CNTNAP3Q9BZ76 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.02■□□□□ 0.16
CNTNAP3Q9BZ76 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CNTNAP3Q9BZ76 AC015967.2-201ENST00000624092 234 ntBASIC16.02■□□□□ 0.16
CNTNAP3Q9BZ76 AC008267.7-201ENST00000624570 1194 ntBASIC16.02■□□□□ 0.16
CNTNAP3Q9BZ76 AC006435.4-201ENST00000625037 234 ntBASIC16.02■□□□□ 0.16
CNTNAP3Q9BZ76 AL356737.1-201ENST00000634391 234 ntBASIC16.02■□□□□ 0.16
CNTNAP3Q9BZ76 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.02■□□□□ 0.16
CNTNAP3Q9BZ76 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNTNAP3Q9BZ76 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.02■□□□□ 0.15
CNTNAP3Q9BZ76 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CNTNAP3Q9BZ76 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CNTNAP3Q9BZ76 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CNTNAP3Q9BZ76 WIZP1-201ENST00000531444 2299 ntBASIC16.02■□□□□ 0.15
CNTNAP3Q9BZ76 AP000997.3-201ENST00000623333 2250 ntBASIC16.02■□□□□ 0.15
CNTNAP3Q9BZ76 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CNTNAP3Q9BZ76 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CNTNAP3Q9BZ76 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CNTNAP3Q9BZ76 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CNTNAP3Q9BZ76 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CNTNAP3Q9BZ76 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CNTNAP3Q9BZ76 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CNTNAP3Q9BZ76 NOC2LP2-201ENST00000407594 1944 ntBASIC16.02■□□□□ 0.15
CNTNAP3Q9BZ76 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CNTNAP3Q9BZ76 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CNTNAP3Q9BZ76 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CNTNAP3Q9BZ76 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CNTNAP3Q9BZ76 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CNTNAP3Q9BZ76 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CNTNAP3Q9BZ76 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CNTNAP3Q9BZ76 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CNTNAP3Q9BZ76 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CNTNAP3Q9BZ76 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CNTNAP3Q9BZ76 BICD1-207ENST00000551848 1962 ntBASIC16.01■□□□□ 0.15
CNTNAP3Q9BZ76 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.01■□□□□ 0.15
CNTNAP3Q9BZ76 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
CNTNAP3Q9BZ76 MIR346-201ENST00000362234 95 ntBASIC16.01■□□□□ 0.15
CNTNAP3Q9BZ76 HINT2P1-201ENST00000419438 481 ntBASIC16.01■□□□□ 0.15
CNTNAP3Q9BZ76 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CNTNAP3Q9BZ76 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.01■□□□□ 0.15
CNTNAP3Q9BZ76 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CNTNAP3Q9BZ76 AC027307.2-201ENST00000591252 911 ntBASIC16.01■□□□□ 0.15
CNTNAP3Q9BZ76 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.01■□□□□ 0.15
CNTNAP3Q9BZ76 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms