Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC026120.1-201ENST00000611536 926 ntBASIC18.45■□□□□ 0.54
TRAIPQ9BWF2 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAIPQ9BWF2 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.45■□□□□ 0.54
TRAIPQ9BWF2 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAIPQ9BWF2 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAIPQ9BWF2 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAIPQ9BWF2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
TRAIPQ9BWF2 CROCCP2-202ENST00000412962 2773 ntBASIC18.45■□□□□ 0.54
TRAIPQ9BWF2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAIPQ9BWF2 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 AL353732.1-201ENST00000569618 1459 ntBASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAIPQ9BWF2 TOP3BP1-201ENST00000420768 1380 ntBASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 HCG4-201ENST00000418983 998 ntBASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 AL671277.1-201ENST00000429656 993 ntBASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 AC109635.5-201ENST00000533593 962 ntBASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 AC091167.2-201ENST00000579581 588 ntBASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 AKAP8P1-201ENST00000434743 1349 ntBASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAIPQ9BWF2 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.42■□□□□ 0.54
TRAIPQ9BWF2 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.42■□□□□ 0.54
TRAIPQ9BWF2 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TRAIPQ9BWF2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAIPQ9BWF2 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAIPQ9BWF2 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAIPQ9BWF2 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TRAIPQ9BWF2 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAIPQ9BWF2 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAIPQ9BWF2 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAIPQ9BWF2 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAIPQ9BWF2 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.42■□□□□ 0.54
TRAIPQ9BWF2 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TRAIPQ9BWF2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAIPQ9BWF2 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms