Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC38A3Q99624 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC38A3Q99624 AC023141.5-201ENST00000458585 616 ntBASIC16.32■□□□□ 0.2
SLC38A3Q99624 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
SLC38A3Q99624 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.32■□□□□ 0.2
SLC38A3Q99624 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SLC38A3Q99624 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC38A3Q99624 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.32■□□□□ 0.2
SLC38A3Q99624 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
SLC38A3Q99624 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC38A3Q99624 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC38A3Q99624 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SLC38A3Q99624 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.32■□□□□ 0.2
SLC38A3Q99624 AL009183.1-201ENST00000603760 355 ntBASIC16.32■□□□□ 0.2
SLC38A3Q99624 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC38A3Q99624 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC38A3Q99624 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.32■□□□□ 0.2
SLC38A3Q99624 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC38A3Q99624 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC38A3Q99624 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SLC38A3Q99624 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC38A3Q99624 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
SLC38A3Q99624 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC38A3Q99624 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC38A3Q99624 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.31■□□□□ 0.2
SLC38A3Q99624 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.31■□□□□ 0.2
SLC38A3Q99624 KRT8P49-201ENST00000604166 1432 ntBASIC16.31■□□□□ 0.2
SLC38A3Q99624 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.31■□□□□ 0.2
SLC38A3Q99624 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC38A3Q99624 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
SLC38A3Q99624 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC38A3Q99624 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC38A3Q99624 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC38A3Q99624 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.31■□□□□ 0.2
SLC38A3Q99624 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.31■□□□□ 0.2
SLC38A3Q99624 AC005237.2-201ENST00000434368 219 ntBASIC16.31■□□□□ 0.2
SLC38A3Q99624 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.31■□□□□ 0.2
SLC38A3Q99624 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.31■□□□□ 0.2
SLC38A3Q99624 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.31■□□□□ 0.2
SLC38A3Q99624 RFPL4AP1-201ENST00000530883 850 ntBASIC16.31■□□□□ 0.2
SLC38A3Q99624 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.31■□□□□ 0.2
SLC38A3Q99624 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC38A3Q99624 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC38A3Q99624 MPDU1-223ENST00000582151 728 ntBASIC16.31■□□□□ 0.2
SLC38A3Q99624 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC38A3Q99624 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC38A3Q99624 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC38A3Q99624 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC38A3Q99624 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC38A3Q99624 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC38A3Q99624 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC38A3Q99624 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC38A3Q99624 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SLC38A3Q99624 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC38A3Q99624 AC131009.4-201ENST00000624048 1740 ntBASIC16.31■□□□□ 0.2
SLC38A3Q99624 SLC22A20-204ENST00000530038 1673 ntBASIC16.3■□□□□ 0.2
SLC38A3Q99624 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SLC38A3Q99624 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC38A3Q99624 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC38A3Q99624 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.3■□□□□ 0.2
SLC38A3Q99624 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC38A3Q99624 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC38A3Q99624 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC38A3Q99624 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC38A3Q99624 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SLC38A3Q99624 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC38A3Q99624 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC38A3Q99624 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC38A3Q99624 AKAP8P1-201ENST00000434743 1349 ntBASIC16.3■□□□□ 0.2
SLC38A3Q99624 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC38A3Q99624 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC38A3Q99624 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC38A3Q99624 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SLC38A3Q99624 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC38A3Q99624 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SLC38A3Q99624 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC38A3Q99624 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SLC38A3Q99624 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC38A3Q99624 AL592309.1-201ENST00000443127 649 ntBASIC16.3■□□□□ 0.2
SLC38A3Q99624 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.3■□□□□ 0.2
SLC38A3Q99624 KRT8P48-201ENST00000515599 1220 ntBASIC16.3■□□□□ 0.2
SLC38A3Q99624 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.3■□□□□ 0.2
SLC38A3Q99624 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC38A3Q99624 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.3■□□□□ 0.2
SLC38A3Q99624 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.3■□□□□ 0.2
SLC38A3Q99624 DUX4L17-201ENST00000557360 1267 ntBASIC16.3■□□□□ 0.2
SLC38A3Q99624 AL135744.1-201ENST00000565098 629 ntBASIC16.3■□□□□ 0.2
SLC38A3Q99624 AL031055.1-201ENST00000606362 631 ntBASIC16.3■□□□□ 0.2
SLC38A3Q99624 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC38A3Q99624 AC106028.4-201ENST00000614509 607 ntBASIC16.3■□□□□ 0.2
SLC38A3Q99624 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC38A3Q99624 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC38A3Q99624 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC38A3Q99624 LINC02012-201ENST00000608206 1725 ntBASIC16.3■□□□□ 0.2
SLC38A3Q99624 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC38A3Q99624 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC38A3Q99624 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC38A3Q99624 PRORSD1P-202ENST00000563365 2154 ntBASIC16.3■□□□□ 0.2
SLC38A3Q99624 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SLC38A3Q99624 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms