Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 MTDHP5-201ENST00000598980 586 ntBASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 PI4KAP1-204ENST00000612579 1703 ntBASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SH3KBP1Q96B97 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 AL590787.1-201ENST00000568856 1315 ntBASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 AC002310.6-201ENST00000624451 1377 ntBASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
SH3KBP1Q96B97 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 AC093525.9-201ENST00000624961 1746 ntBASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 UPF3AP3-201ENST00000420996 769 ntBASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 HCG4B-203ENST00000450128 991 ntBASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
SH3KBP1Q96B97 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms