Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.68■□□□□ 0.42
SHKBP1Q8TBC3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.68■□□□□ 0.42
SHKBP1Q8TBC3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHKBP1Q8TBC3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHKBP1Q8TBC3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHKBP1Q8TBC3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHKBP1Q8TBC3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SHKBP1Q8TBC3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHKBP1Q8TBC3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHKBP1Q8TBC3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.68■□□□□ 0.42
SHKBP1Q8TBC3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHKBP1Q8TBC3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.68■□□□□ 0.42
SHKBP1Q8TBC3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
SHKBP1Q8TBC3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SHKBP1Q8TBC3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 AC012569.1-201ENST00000591191 1524 ntBASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 AC092364.2-202ENST00000597012 1073 ntBASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 AKAP8P1-201ENST00000434743 1349 ntBASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHKBP1Q8TBC3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 EGFEM1P-202ENST00000431685 1563 ntBASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 FAM58DP-201ENST00000428076 619 ntBASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 AC069335.1-201ENST00000489972 472 ntBASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 AL009183.1-201ENST00000603760 355 ntBASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.66■□□□□ 0.42
SHKBP1Q8TBC3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SHKBP1Q8TBC3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SHKBP1Q8TBC3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHKBP1Q8TBC3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHKBP1Q8TBC3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SHKBP1Q8TBC3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SHKBP1Q8TBC3 AL353732.1-201ENST00000569618 1459 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms