Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BEST2Q8NFU1 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BEST2Q8NFU1 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BEST2Q8NFU1 PMS2P2-201ENST00000425039 1128 ntBASIC18.09■□□□□ 0.49
BEST2Q8NFU1 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BEST2Q8NFU1 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
BEST2Q8NFU1 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.09■□□□□ 0.49
BEST2Q8NFU1 MIR3909-201ENST00000579518 119 ntBASIC18.09■□□□□ 0.49
BEST2Q8NFU1 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.09■□□□□ 0.49
BEST2Q8NFU1 AL161645.1-201ENST00000622716 1255 ntBASIC18.09■□□□□ 0.49
BEST2Q8NFU1 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.09■□□□□ 0.49
BEST2Q8NFU1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
BEST2Q8NFU1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BEST2Q8NFU1 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BEST2Q8NFU1 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BEST2Q8NFU1 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BEST2Q8NFU1 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BEST2Q8NFU1 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
BEST2Q8NFU1 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BEST2Q8NFU1 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BEST2Q8NFU1 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BEST2Q8NFU1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BEST2Q8NFU1 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.09■□□□□ 0.49
BEST2Q8NFU1 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.09■□□□□ 0.49
BEST2Q8NFU1 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
BEST2Q8NFU1 LINC00895-201ENST00000629028 1637 ntBASIC18.09■□□□□ 0.49
BEST2Q8NFU1 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
BEST2Q8NFU1 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
BEST2Q8NFU1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
BEST2Q8NFU1 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
BEST2Q8NFU1 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
BEST2Q8NFU1 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
BEST2Q8NFU1 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
BEST2Q8NFU1 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.08■□□□□ 0.49
BEST2Q8NFU1 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
BEST2Q8NFU1 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.49
BEST2Q8NFU1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
BEST2Q8NFU1 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
BEST2Q8NFU1 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
BEST2Q8NFU1 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
BEST2Q8NFU1 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
BEST2Q8NFU1 PMS2P4-201ENST00000412466 1052 ntBASIC18.08■□□□□ 0.48
BEST2Q8NFU1 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
BEST2Q8NFU1 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
BEST2Q8NFU1 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.08■□□□□ 0.48
BEST2Q8NFU1 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
BEST2Q8NFU1 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.08■□□□□ 0.48
BEST2Q8NFU1 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.08■□□□□ 0.48
BEST2Q8NFU1 AC099522.2-201ENST00000607001 744 ntBASIC18.08■□□□□ 0.48
BEST2Q8NFU1 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
BEST2Q8NFU1 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
BEST2Q8NFU1 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
BEST2Q8NFU1 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BEST2Q8NFU1 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
BEST2Q8NFU1 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.08■□□□□ 0.48
BEST2Q8NFU1 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BEST2Q8NFU1 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
BEST2Q8NFU1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BEST2Q8NFU1 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
BEST2Q8NFU1 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.08■□□□□ 0.48
BEST2Q8NFU1 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.08■□□□□ 0.48
BEST2Q8NFU1 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
BEST2Q8NFU1 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
BEST2Q8NFU1 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BEST2Q8NFU1 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
BEST2Q8NFU1 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
BEST2Q8NFU1 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
BEST2Q8NFU1 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
BEST2Q8NFU1 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.07■□□□□ 0.48
BEST2Q8NFU1 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
BEST2Q8NFU1 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BEST2Q8NFU1 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
BEST2Q8NFU1 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
BEST2Q8NFU1 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
BEST2Q8NFU1 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.07■□□□□ 0.48
BEST2Q8NFU1 AL355306.1-201ENST00000415580 579 ntBASIC18.07■□□□□ 0.48
BEST2Q8NFU1 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.07■□□□□ 0.48
BEST2Q8NFU1 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.07■□□□□ 0.48
BEST2Q8NFU1 AL671277.1-201ENST00000429656 993 ntBASIC18.07■□□□□ 0.48
BEST2Q8NFU1 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BEST2Q8NFU1 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
BEST2Q8NFU1 FAM86C2P-203ENST00000528684 1004 ntBASIC18.07■□□□□ 0.48
BEST2Q8NFU1 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.07■□□□□ 0.48
BEST2Q8NFU1 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
BEST2Q8NFU1 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
BEST2Q8NFU1 SNHG9-202ENST00000564014 471 ntBASIC18.07■□□□□ 0.48
BEST2Q8NFU1 AL596442.2-201ENST00000610240 980 ntBASIC18.07■□□□□ 0.48
BEST2Q8NFU1 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.07■□□□□ 0.48
BEST2Q8NFU1 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.07■□□□□ 0.48
BEST2Q8NFU1 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
BEST2Q8NFU1 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
BEST2Q8NFU1 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
BEST2Q8NFU1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
BEST2Q8NFU1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
BEST2Q8NFU1 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BEST2Q8NFU1 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
BEST2Q8NFU1 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.07■□□□□ 0.48
BEST2Q8NFU1 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
BEST2Q8NFU1 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms