Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.83■□□□□ 0.77
SMC1BQ8NDV3 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC19.83■□□□□ 0.77
SMC1BQ8NDV3 AC091167.2-201ENST00000579581 588 ntBASIC19.83■□□□□ 0.77
SMC1BQ8NDV3 AC010319.3-201ENST00000597028 470 ntBASIC19.83■□□□□ 0.77
SMC1BQ8NDV3 AC233724.13-201ENST00000598383 410 ntBASIC19.83■□□□□ 0.77
SMC1BQ8NDV3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.83■□□□□ 0.77
SMC1BQ8NDV3 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC19.83■□□□□ 0.77
SMC1BQ8NDV3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMC1BQ8NDV3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SMC1BQ8NDV3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMC1BQ8NDV3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMC1BQ8NDV3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMC1BQ8NDV3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMC1BQ8NDV3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SMC1BQ8NDV3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMC1BQ8NDV3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.83■□□□□ 0.76
SMC1BQ8NDV3 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC19.83■□□□□ 0.76
SMC1BQ8NDV3 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC19.83■□□□□ 0.76
SMC1BQ8NDV3 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC19.83■□□□□ 0.76
SMC1BQ8NDV3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SMC1BQ8NDV3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SMC1BQ8NDV3 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMC1BQ8NDV3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
SMC1BQ8NDV3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMC1BQ8NDV3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMC1BQ8NDV3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
SMC1BQ8NDV3 AC120498.9-201ENST00000339021 3867 ntBASIC19.82■□□□□ 0.76
SMC1BQ8NDV3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMC1BQ8NDV3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMC1BQ8NDV3 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
SMC1BQ8NDV3 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
SMC1BQ8NDV3 SLC25A24P2-201ENST00000415059 510 ntBASIC19.82■□□□□ 0.76
SMC1BQ8NDV3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.82■□□□□ 0.76
SMC1BQ8NDV3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SMC1BQ8NDV3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SMC1BQ8NDV3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC19.82■□□□□ 0.76
SMC1BQ8NDV3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.82■□□□□ 0.76
SMC1BQ8NDV3 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC19.82■□□□□ 0.76
SMC1BQ8NDV3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC19.82■□□□□ 0.76
SMC1BQ8NDV3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMC1BQ8NDV3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMC1BQ8NDV3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMC1BQ8NDV3 LETM1P2-201ENST00000597330 2178 ntBASIC19.82■□□□□ 0.76
SMC1BQ8NDV3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMC1BQ8NDV3 BCL2-203ENST00000589955 5011 ntBASIC19.82■□□□□ 0.76
SMC1BQ8NDV3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMC1BQ8NDV3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMC1BQ8NDV3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMC1BQ8NDV3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMC1BQ8NDV3 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMC1BQ8NDV3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.81■□□□□ 0.76
SMC1BQ8NDV3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.81■□□□□ 0.76
SMC1BQ8NDV3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.81■□□□□ 0.76
SMC1BQ8NDV3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SMC1BQ8NDV3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.81■□□□□ 0.76
SMC1BQ8NDV3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SMC1BQ8NDV3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMC1BQ8NDV3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMC1BQ8NDV3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMC1BQ8NDV3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMC1BQ8NDV3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SMC1BQ8NDV3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SMC1BQ8NDV3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMC1BQ8NDV3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.81■□□□□ 0.76
SMC1BQ8NDV3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMC1BQ8NDV3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC19.81■□□□□ 0.76
SMC1BQ8NDV3 AC005229.1-201ENST00000392885 409 ntBASIC19.81■□□□□ 0.76
SMC1BQ8NDV3 CSF2RBP1-201ENST00000447905 391 ntBASIC19.81■□□□□ 0.76
SMC1BQ8NDV3 APRT-204ENST00000563655 709 ntTSL 5 BASIC19.81■□□□□ 0.76
SMC1BQ8NDV3 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMC1BQ8NDV3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.81■□□□□ 0.76
SMC1BQ8NDV3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMC1BQ8NDV3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMC1BQ8NDV3 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC19.81■□□□□ 0.76
SMC1BQ8NDV3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.81■□□□□ 0.76
SMC1BQ8NDV3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMC1BQ8NDV3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMC1BQ8NDV3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMC1BQ8NDV3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMC1BQ8NDV3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMC1BQ8NDV3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.8■□□□□ 0.76
SMC1BQ8NDV3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMC1BQ8NDV3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMC1BQ8NDV3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMC1BQ8NDV3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMC1BQ8NDV3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SMC1BQ8NDV3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMC1BQ8NDV3 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMC1BQ8NDV3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMC1BQ8NDV3 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMC1BQ8NDV3 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMC1BQ8NDV3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.8■□□□□ 0.76
SMC1BQ8NDV3 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC19.8■□□□□ 0.76
SMC1BQ8NDV3 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC19.8■□□□□ 0.76
SMC1BQ8NDV3 SERBP1P3-201ENST00000459980 809 ntBASIC19.8■□□□□ 0.76
SMC1BQ8NDV3 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC19.8■□□□□ 0.76
SMC1BQ8NDV3 PRYP6-201ENST00000514804 343 ntBASIC19.8■□□□□ 0.76
SMC1BQ8NDV3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC19.8■□□□□ 0.76
SMC1BQ8NDV3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
SMC1BQ8NDV3 AC021097.1-201ENST00000607902 574 ntBASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms