Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.43■□□□□ 0.38
PHTF2Q8N3S3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHTF2Q8N3S3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.43■□□□□ 0.38
PHTF2Q8N3S3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PHTF2Q8N3S3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHTF2Q8N3S3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.43■□□□□ 0.38
PHTF2Q8N3S3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.43■□□□□ 0.38
PHTF2Q8N3S3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHTF2Q8N3S3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHTF2Q8N3S3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 TSEN15P1-201ENST00000423257 515 ntBASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 AC099522.2-201ENST00000607001 744 ntBASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.42■□□□□ 0.38
PHTF2Q8N3S3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.41■□□□□ 0.38
PHTF2Q8N3S3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHTF2Q8N3S3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHTF2Q8N3S3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PHTF2Q8N3S3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.41■□□□□ 0.38
PHTF2Q8N3S3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PHTF2Q8N3S3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHTF2Q8N3S3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHTF2Q8N3S3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHTF2Q8N3S3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHTF2Q8N3S3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHTF2Q8N3S3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHTF2Q8N3S3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHTF2Q8N3S3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PHTF2Q8N3S3 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PHTF2Q8N3S3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.41■□□□□ 0.38
PHTF2Q8N3S3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
PHTF2Q8N3S3 AC112191.1-201ENST00000523689 701 ntBASIC17.41■□□□□ 0.38
PHTF2Q8N3S3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.41■□□□□ 0.38
PHTF2Q8N3S3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.41■□□□□ 0.38
PHTF2Q8N3S3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PHTF2Q8N3S3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PHTF2Q8N3S3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.41■□□□□ 0.38
PHTF2Q8N3S3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PHTF2Q8N3S3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHTF2Q8N3S3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHTF2Q8N3S3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHTF2Q8N3S3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHTF2Q8N3S3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHTF2Q8N3S3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.4■□□□□ 0.38
PHTF2Q8N3S3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.4■□□□□ 0.38
PHTF2Q8N3S3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PHTF2Q8N3S3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PHTF2Q8N3S3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.4■□□□□ 0.38
PHTF2Q8N3S3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PHTF2Q8N3S3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.4■□□□□ 0.38
PHTF2Q8N3S3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.4■□□□□ 0.38
PHTF2Q8N3S3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PHTF2Q8N3S3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PHTF2Q8N3S3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.4■□□□□ 0.38
PHTF2Q8N3S3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.4■□□□□ 0.38
PHTF2Q8N3S3 AC106886.4-201ENST00000623557 2502 ntBASIC17.4■□□□□ 0.38
PHTF2Q8N3S3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.4■□□□□ 0.38
PHTF2Q8N3S3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PHTF2Q8N3S3 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHTF2Q8N3S3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.4■□□□□ 0.38
PHTF2Q8N3S3 AC140658.5-201ENST00000438532 169 ntBASIC17.4■□□□□ 0.38
PHTF2Q8N3S3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PHTF2Q8N3S3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.4■□□□□ 0.38
PHTF2Q8N3S3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.4■□□□□ 0.38
PHTF2Q8N3S3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.4■□□□□ 0.38
PHTF2Q8N3S3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.4■□□□□ 0.38
PHTF2Q8N3S3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.4■□□□□ 0.38
PHTF2Q8N3S3 AC004835.2-201ENST00000603762 682 ntBASIC17.4■□□□□ 0.38
PHTF2Q8N3S3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.4■□□□□ 0.38
PHTF2Q8N3S3 AC093028.1-201ENST00000622998 982 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms