Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM50Q86XT4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 LINC01225-203ENST00000563550 1244 ntBASIC18.75■□□□□ 0.59
TRIM50Q86XT4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 AC005498.2-205ENST00000593218 784 ntBASIC18.75■□□□□ 0.59
TRIM50Q86XT4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 AC016027.1-202ENST00000607927 1699 ntBASIC18.75■□□□□ 0.59
TRIM50Q86XT4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 AC141586.5-201ENST00000624546 2050 ntBASIC18.75■□□□□ 0.59
TRIM50Q86XT4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM50Q86XT4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM50Q86XT4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM50Q86XT4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM50Q86XT4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.74■□□□□ 0.59
TRIM50Q86XT4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM50Q86XT4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM50Q86XT4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM50Q86XT4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TRIM50Q86XT4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TRIM50Q86XT4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
TRIM50Q86XT4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM50Q86XT4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM50Q86XT4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM50Q86XT4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM50Q86XT4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM50Q86XT4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM50Q86XT4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM50Q86XT4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM50Q86XT4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM50Q86XT4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.74■□□□□ 0.59
TRIM50Q86XT4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.74■□□□□ 0.59
TRIM50Q86XT4 FAM86GP-201ENST00000448322 971 ntBASIC18.74■□□□□ 0.59
TRIM50Q86XT4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM50Q86XT4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.74■□□□□ 0.59
TRIM50Q86XT4 CYP2A7P1-201ENST00000595391 815 ntBASIC18.74■□□□□ 0.59
TRIM50Q86XT4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.74■□□□□ 0.59
TRIM50Q86XT4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.74■□□□□ 0.59
TRIM50Q86XT4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM50Q86XT4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM50Q86XT4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM50Q86XT4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM50Q86XT4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM50Q86XT4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM50Q86XT4 UXT-AS1-201ENST00000590504 1525 ntBASIC18.74■□□□□ 0.59
TRIM50Q86XT4 WASH6P-202ENST00000359512 1437 ntBASIC18.74■□□□□ 0.59
TRIM50Q86XT4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms