Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COPS6Q7L5N1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COPS6Q7L5N1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
COPS6Q7L5N1 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
COPS6Q7L5N1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
COPS6Q7L5N1 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COPS6Q7L5N1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
COPS6Q7L5N1 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
COPS6Q7L5N1 AC060834.1-201ENST00000443027 2032 ntBASIC21.16■□□□□ 0.98
COPS6Q7L5N1 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC21.16■□□□□ 0.98
COPS6Q7L5N1 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC21.16■□□□□ 0.98
COPS6Q7L5N1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COPS6Q7L5N1 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
COPS6Q7L5N1 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC21.16■□□□□ 0.98
COPS6Q7L5N1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
COPS6Q7L5N1 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COPS6Q7L5N1 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COPS6Q7L5N1 AC142381.1-201ENST00000426099 345 ntBASIC21.16■□□□□ 0.98
COPS6Q7L5N1 KLF2P3-201ENST00000451977 1087 ntBASIC21.16■□□□□ 0.98
COPS6Q7L5N1 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC21.16■□□□□ 0.98
COPS6Q7L5N1 KRT18P34-201ENST00000488218 1270 ntBASIC21.16■□□□□ 0.98
COPS6Q7L5N1 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC21.16■□□□□ 0.98
COPS6Q7L5N1 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC21.16■□□□□ 0.98
COPS6Q7L5N1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COPS6Q7L5N1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COPS6Q7L5N1 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COPS6Q7L5N1 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
COPS6Q7L5N1 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC21.16■□□□□ 0.98
COPS6Q7L5N1 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COPS6Q7L5N1 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
COPS6Q7L5N1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COPS6Q7L5N1 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
COPS6Q7L5N1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.16■□□□□ 0.98
COPS6Q7L5N1 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC21.15■□□□□ 0.98
COPS6Q7L5N1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COPS6Q7L5N1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COPS6Q7L5N1 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COPS6Q7L5N1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC21.15■□□□□ 0.98
COPS6Q7L5N1 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COPS6Q7L5N1 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COPS6Q7L5N1 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
COPS6Q7L5N1 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COPS6Q7L5N1 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
COPS6Q7L5N1 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC21.15■□□□□ 0.98
COPS6Q7L5N1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
COPS6Q7L5N1 WRB-204ENST00000398753 699 ntTSL 3 BASIC21.15■□□□□ 0.98
COPS6Q7L5N1 MIR943-201ENST00000401286 94 ntBASIC21.15■□□□□ 0.98
COPS6Q7L5N1 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
COPS6Q7L5N1 AC055876.3-201ENST00000431496 288 ntBASIC21.15■□□□□ 0.98
COPS6Q7L5N1 WDR53-204ENST00000433160 887 ntTSL 5 BASIC21.15■□□□□ 0.98
COPS6Q7L5N1 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC21.15■□□□□ 0.98
COPS6Q7L5N1 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC21.15■□□□□ 0.98
COPS6Q7L5N1 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC21.15■□□□□ 0.98
COPS6Q7L5N1 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC21.15■□□□□ 0.98
COPS6Q7L5N1 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC21.15■□□□□ 0.98
COPS6Q7L5N1 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC21.15■□□□□ 0.98
COPS6Q7L5N1 AC138649.4-201ENST00000612222 287 ntBASIC21.15■□□□□ 0.98
COPS6Q7L5N1 AL645608.8-201ENST00000606034 2086 ntBASIC21.15■□□□□ 0.98
COPS6Q7L5N1 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
COPS6Q7L5N1 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COPS6Q7L5N1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
COPS6Q7L5N1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COPS6Q7L5N1 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
COPS6Q7L5N1 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC21.15■□□□□ 0.98
COPS6Q7L5N1 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COPS6Q7L5N1 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC21.15■□□□□ 0.98
COPS6Q7L5N1 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
COPS6Q7L5N1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC21.14■□□□□ 0.98
COPS6Q7L5N1 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC21.14■□□□□ 0.98
COPS6Q7L5N1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
COPS6Q7L5N1 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC21.14■□□□□ 0.98
COPS6Q7L5N1 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.14■□□□□ 0.98
COPS6Q7L5N1 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
COPS6Q7L5N1 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
COPS6Q7L5N1 PCDHB18P-201ENST00000524813 2368 ntBASIC21.14■□□□□ 0.97
COPS6Q7L5N1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COPS6Q7L5N1 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
COPS6Q7L5N1 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COPS6Q7L5N1 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COPS6Q7L5N1 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC21.14■□□□□ 0.97
COPS6Q7L5N1 AC073389.1-201ENST00000595595 795 ntBASIC21.14■□□□□ 0.97
COPS6Q7L5N1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COPS6Q7L5N1 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC21.14■□□□□ 0.97
COPS6Q7L5N1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.14■□□□□ 0.97
COPS6Q7L5N1 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COPS6Q7L5N1 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COPS6Q7L5N1 AL645728.1-201ENST00000366221 2101 ntBASIC21.14■□□□□ 0.97
COPS6Q7L5N1 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COPS6Q7L5N1 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
COPS6Q7L5N1 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
COPS6Q7L5N1 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
COPS6Q7L5N1 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
COPS6Q7L5N1 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COPS6Q7L5N1 FOXO1B-201ENST00000504678 1527 ntBASIC21.14■□□□□ 0.97
COPS6Q7L5N1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COPS6Q7L5N1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
COPS6Q7L5N1 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COPS6Q7L5N1 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COPS6Q7L5N1 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC21.13■□□□□ 0.97
COPS6Q7L5N1 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms