Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 LINC00982-205ENST00000420957 435 ntBASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 LAGE3P1-201ENST00000425356 484 ntBASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 AP001005.1-201ENST00000571755 1248 ntBASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 AL589182.2-201ENST00000619332 1049 ntBASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
KHDC1Q4VXA5 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KHDC1Q4VXA5 AP002414.3-201ENST00000589352 1468 ntBASIC17.12■□□□□ 0.33
KHDC1Q4VXA5 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
KHDC1Q4VXA5 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
KHDC1Q4VXA5 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.12■□□□□ 0.33
KHDC1Q4VXA5 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.12■□□□□ 0.33
KHDC1Q4VXA5 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
KHDC1Q4VXA5 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.12■□□□□ 0.33
KHDC1Q4VXA5 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KHDC1Q4VXA5 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.12■□□□□ 0.33
KHDC1Q4VXA5 ELK2BP-201ENST00000415014 1224 ntBASIC17.12■□□□□ 0.33
KHDC1Q4VXA5 AC079776.4-201ENST00000511039 504 ntBASIC17.12■□□□□ 0.33
KHDC1Q4VXA5 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.12■□□□□ 0.33
KHDC1Q4VXA5 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.12■□□□□ 0.33
KHDC1Q4VXA5 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.12■□□□□ 0.33
KHDC1Q4VXA5 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.12■□□□□ 0.33
KHDC1Q4VXA5 AC139887.3-201ENST00000568585 713 ntBASIC17.12■□□□□ 0.33
KHDC1Q4VXA5 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
KHDC1Q4VXA5 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
KHDC1Q4VXA5 AC008735.5-201ENST00000623544 497 ntBASIC17.12■□□□□ 0.33
KHDC1Q4VXA5 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KHDC1Q4VXA5 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.12■□□□□ 0.33
KHDC1Q4VXA5 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.12■□□□□ 0.33
KHDC1Q4VXA5 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KHDC1Q4VXA5 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.12■□□□□ 0.33
KHDC1Q4VXA5 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KHDC1Q4VXA5 NCF1C-201ENST00000438382 1427 ntBASIC17.12■□□□□ 0.33
KHDC1Q4VXA5 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KHDC1Q4VXA5 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KHDC1Q4VXA5 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
KHDC1Q4VXA5 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 KRT18P27-201ENST00000427733 1299 ntBASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 AL353135.1-201ENST00000606729 504 ntBASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 AC004706.3-202ENST00000621574 984 ntBASIC17.11■□□□□ 0.33
KHDC1Q4VXA5 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms