Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEP78395 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PRAMEP78395 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEP78395 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEP78395 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEP78395 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.05■□□□□ 0.32
PRAMEP78395 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PRAMEP78395 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
PRAMEP78395 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEP78395 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
PRAMEP78395 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.05■□□□□ 0.32
PRAMEP78395 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEP78395 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
PRAMEP78395 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEP78395 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
PRAMEP78395 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEP78395 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PRAMEP78395 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEP78395 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.05■□□□□ 0.32
PRAMEP78395 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
PRAMEP78395 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.05■□□□□ 0.32
PRAMEP78395 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.05■□□□□ 0.32
PRAMEP78395 AC021087.4-201ENST00000563761 564 ntBASIC17.05■□□□□ 0.32
PRAMEP78395 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEP78395 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
PRAMEP78395 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEP78395 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEP78395 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.05■□□□□ 0.32
PRAMEP78395 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.05■□□□□ 0.32
PRAMEP78395 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEP78395 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.05■□□□□ 0.32
PRAMEP78395 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEP78395 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEP78395 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEP78395 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PRAMEP78395 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.04■□□□□ 0.32
PRAMEP78395 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.04■□□□□ 0.32
PRAMEP78395 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEP78395 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.04■□□□□ 0.32
PRAMEP78395 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEP78395 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PRAMEP78395 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.04■□□□□ 0.32
PRAMEP78395 AC078925.2-201ENST00000624013 1973 ntBASIC17.04■□□□□ 0.32
PRAMEP78395 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEP78395 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEP78395 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEP78395 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEP78395 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEP78395 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEP78395 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEP78395 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEP78395 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
PRAMEP78395 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PRAMEP78395 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
PRAMEP78395 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEP78395 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.04■□□□□ 0.32
PRAMEP78395 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEP78395 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.04■□□□□ 0.32
PRAMEP78395 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.04■□□□□ 0.32
PRAMEP78395 UNC93B7-201ENST00000509439 705 ntBASIC17.04■□□□□ 0.32
PRAMEP78395 AC073648.2-201ENST00000510116 352 ntBASIC17.04■□□□□ 0.32
PRAMEP78395 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.04■□□□□ 0.32
PRAMEP78395 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.04■□□□□ 0.32
PRAMEP78395 AC025062.2-201ENST00000605477 670 ntBASIC17.04■□□□□ 0.32
PRAMEP78395 AC004706.3-202ENST00000621574 984 ntBASIC17.04■□□□□ 0.32
PRAMEP78395 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.04■□□□□ 0.32
PRAMEP78395 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.04■□□□□ 0.32
PRAMEP78395 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEP78395 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEP78395 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEP78395 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PRAMEP78395 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEP78395 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.04■□□□□ 0.32
PRAMEP78395 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.04■□□□□ 0.32
PRAMEP78395 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PRAMEP78395 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEP78395 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.04■□□□□ 0.32
PRAMEP78395 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEP78395 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEP78395 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEP78395 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRAMEP78395 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.04■□□□□ 0.32
PRAMEP78395 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.04■□□□□ 0.32
PRAMEP78395 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEP78395 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PRAMEP78395 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
PRAMEP78395 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEP78395 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEP78395 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEP78395 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEP78395 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.03■□□□□ 0.32
PRAMEP78395 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.03■□□□□ 0.32
PRAMEP78395 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PRAMEP78395 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.03■□□□□ 0.32
PRAMEP78395 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEP78395 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEP78395 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEP78395 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEP78395 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PRAMEP78395 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms