Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP4BP1P59074 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHMP4BP1P59074 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP4BP1P59074 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP4BP1P59074 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP4BP1P59074 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP4BP1P59074 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP4BP1P59074 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.31■□□□□ 0.68
CHMP4BP1P59074 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP4BP1P59074 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CHMP4BP1P59074 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP4BP1P59074 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CHMP4BP1P59074 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP4BP1P59074 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP4BP1P59074 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP4BP1P59074 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP4BP1P59074 AC096734.2-201ENST00000562054 433 ntBASIC19.31■□□□□ 0.68
CHMP4BP1P59074 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.31■□□□□ 0.68
CHMP4BP1P59074 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.31■□□□□ 0.68
CHMP4BP1P59074 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP4BP1P59074 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP4BP1P59074 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.31■□□□□ 0.68
CHMP4BP1P59074 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP4BP1P59074 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHMP4BP1P59074 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.31■□□□□ 0.68
CHMP4BP1P59074 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.31■□□□□ 0.68
CHMP4BP1P59074 KRT18P55-202ENST00000578578 1546 ntBASIC19.3■□□□□ 0.68
CHMP4BP1P59074 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
CHMP4BP1P59074 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP4BP1P59074 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.3■□□□□ 0.68
CHMP4BP1P59074 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP4BP1P59074 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP4BP1P59074 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP4BP1P59074 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP4BP1P59074 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP4BP1P59074 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.3■□□□□ 0.68
CHMP4BP1P59074 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.3■□□□□ 0.68
CHMP4BP1P59074 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.3■□□□□ 0.68
CHMP4BP1P59074 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.3■□□□□ 0.68
CHMP4BP1P59074 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.3■□□□□ 0.68
CHMP4BP1P59074 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.3■□□□□ 0.68
CHMP4BP1P59074 LINC02084-201ENST00000606069 1096 ntBASIC19.3■□□□□ 0.68
CHMP4BP1P59074 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.3■□□□□ 0.68
CHMP4BP1P59074 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP4BP1P59074 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CHMP4BP1P59074 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP4BP1P59074 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP4BP1P59074 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.3■□□□□ 0.68
CHMP4BP1P59074 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHMP4BP1P59074 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CHMP4BP1P59074 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP4BP1P59074 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP4BP1P59074 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CHMP4BP1P59074 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP4BP1P59074 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CHMP4BP1P59074 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.29■□□□□ 0.68
CHMP4BP1P59074 UBALD1-205ENST00000590891 2641 ntBASIC19.29■□□□□ 0.68
CHMP4BP1P59074 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CHMP4BP1P59074 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP4BP1P59074 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP4BP1P59074 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
CHMP4BP1P59074 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP4BP1P59074 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP4BP1P59074 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP4BP1P59074 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.29■□□□□ 0.68
CHMP4BP1P59074 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.29■□□□□ 0.68
CHMP4BP1P59074 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.29■□□□□ 0.68
CHMP4BP1P59074 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CHMP4BP1P59074 AC074386.1-202ENST00000463561 864 ntBASIC19.29■□□□□ 0.68
CHMP4BP1P59074 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.29■□□□□ 0.68
CHMP4BP1P59074 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.29■□□□□ 0.68
CHMP4BP1P59074 AC023141.13-201ENST00000604991 943 ntBASIC19.29■□□□□ 0.68
CHMP4BP1P59074 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP4BP1P59074 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP4BP1P59074 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP4BP1P59074 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP4BP1P59074 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.29■□□□□ 0.68
CHMP4BP1P59074 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.29■□□□□ 0.68
CHMP4BP1P59074 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CHMP4BP1P59074 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP4BP1P59074 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CHMP4BP1P59074 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CHMP4BP1P59074 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHMP4BP1P59074 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP4BP1P59074 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.28■□□□□ 0.68
CHMP4BP1P59074 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP4BP1P59074 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP4BP1P59074 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP4BP1P59074 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP4BP1P59074 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CHMP4BP1P59074 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.28■□□□□ 0.68
CHMP4BP1P59074 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CHMP4BP1P59074 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CHMP4BP1P59074 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
CHMP4BP1P59074 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP4BP1P59074 AC046158.3-201ENST00000624947 2558 ntBASIC19.28■□□□□ 0.68
CHMP4BP1P59074 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP4BP1P59074 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.28■□□□□ 0.68
CHMP4BP1P59074 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CHMP4BP1P59074 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms