Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RAB38P57729 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.83■□□□□ 0.13
RAB38P57729 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RAB38P57729 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RAB38P57729 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.83■□□□□ 0.12
RAB38P57729 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RAB38P57729 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB38P57729 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.83■□□□□ 0.12
RAB38P57729 AC023274.1-201ENST00000418278 595 ntBASIC15.83■□□□□ 0.12
RAB38P57729 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.83■□□□□ 0.12
RAB38P57729 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.83■□□□□ 0.12
RAB38P57729 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.83■□□□□ 0.12
RAB38P57729 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.83■□□□□ 0.12
RAB38P57729 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.83■□□□□ 0.12
RAB38P57729 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RAB38P57729 AL513190.1-201ENST00000621254 727 ntBASIC15.83■□□□□ 0.12
RAB38P57729 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.83■□□□□ 0.12
RAB38P57729 AC092865.6-201ENST00000642101 219 ntBASIC15.83■□□□□ 0.12
RAB38P57729 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RAB38P57729 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB38P57729 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.83■□□□□ 0.12
RAB38P57729 AC078925.2-201ENST00000624013 1973 ntBASIC15.83■□□□□ 0.12
RAB38P57729 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.83■□□□□ 0.12
RAB38P57729 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.83■□□□□ 0.12
RAB38P57729 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB38P57729 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB38P57729 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB38P57729 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RAB38P57729 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB38P57729 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB38P57729 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RAB38P57729 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB38P57729 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB38P57729 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB38P57729 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
RAB38P57729 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RAB38P57729 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB38P57729 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB38P57729 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB38P57729 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB38P57729 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB38P57729 AC106886.4-201ENST00000623557 2502 ntBASIC15.82■□□□□ 0.12
RAB38P57729 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB38P57729 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.82■□□□□ 0.12
RAB38P57729 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB38P57729 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.82■□□□□ 0.12
RAB38P57729 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.82■□□□□ 0.12
RAB38P57729 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RAB38P57729 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.82■□□□□ 0.12
RAB38P57729 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
RAB38P57729 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RAB38P57729 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB38P57729 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.82■□□□□ 0.12
RAB38P57729 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.82■□□□□ 0.12
RAB38P57729 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.82■□□□□ 0.12
RAB38P57729 AC002347.1-201ENST00000569543 541 ntBASIC15.82■□□□□ 0.12
RAB38P57729 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB38P57729 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.82■□□□□ 0.12
RAB38P57729 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB38P57729 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.82■□□□□ 0.12
RAB38P57729 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB38P57729 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB38P57729 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RAB38P57729 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB38P57729 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB38P57729 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RAB38P57729 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
RAB38P57729 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB38P57729 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB38P57729 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB38P57729 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB38P57729 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB38P57729 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.82■□□□□ 0.12
RAB38P57729 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB38P57729 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RAB38P57729 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB38P57729 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB38P57729 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB38P57729 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB38P57729 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.81■□□□□ 0.12
RAB38P57729 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB38P57729 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB38P57729 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB38P57729 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB38P57729 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB38P57729 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB38P57729 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB38P57729 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB38P57729 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB38P57729 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB38P57729 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.81■□□□□ 0.12
RAB38P57729 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.81■□□□□ 0.12
RAB38P57729 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
RAB38P57729 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB38P57729 AC074386.1-202ENST00000463561 864 ntBASIC15.81■□□□□ 0.12
RAB38P57729 HLA-J-202ENST00000469281 1241 ntBASIC15.81■□□□□ 0.12
RAB38P57729 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB38P57729 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB38P57729 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.81■□□□□ 0.12
RAB38P57729 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms