Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC139713.2-201ENST00000641328 2723 ntBASIC23.78■■□□□ 1.4
CLTCL1P53675 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CLTCL1P53675 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CLTCL1P53675 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLTCL1P53675 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLTCL1P53675 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CLTCL1P53675 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC23.77■■□□□ 1.4
CLTCL1P53675 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLTCL1P53675 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLTCL1P53675 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CLTCL1P53675 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
CLTCL1P53675 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLTCL1P53675 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC23.77■■□□□ 1.4
CLTCL1P53675 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC23.77■■□□□ 1.4
CLTCL1P53675 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC23.77■■□□□ 1.4
CLTCL1P53675 AC140912.1-201ENST00000577171 1054 ntBASIC23.77■■□□□ 1.4
CLTCL1P53675 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC23.77■■□□□ 1.4
CLTCL1P53675 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLTCL1P53675 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CLTCL1P53675 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
CLTCL1P53675 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CLTCL1P53675 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CLTCL1P53675 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC23.77■■□□□ 1.4
CLTCL1P53675 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CLTCL1P53675 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC23.77■■□□□ 1.4
CLTCL1P53675 COQ6-210ENST00000554920 649 ntTSL 3 BASIC23.77■■□□□ 1.4
CLTCL1P53675 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC23.77■■□□□ 1.4
CLTCL1P53675 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC23.77■■□□□ 1.4
CLTCL1P53675 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.39
CLTCL1P53675 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC23.77■■□□□ 1.39
CLTCL1P53675 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CLTCL1P53675 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CLTCL1P53675 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC23.76■■□□□ 1.39
CLTCL1P53675 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC23.76■■□□□ 1.39
CLTCL1P53675 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC23.76■■□□□ 1.39
CLTCL1P53675 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CLTCL1P53675 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CLTCL1P53675 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLTCL1P53675 AMT-206ENST00000458307 1860 ntTSL 2 BASIC23.76■■□□□ 1.39
CLTCL1P53675 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CLTCL1P53675 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLTCL1P53675 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC23.76■■□□□ 1.39
CLTCL1P53675 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CLTCL1P53675 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC23.76■■□□□ 1.39
CLTCL1P53675 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLTCL1P53675 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLTCL1P53675 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC23.76■■□□□ 1.39
CLTCL1P53675 CDK4-206ENST00000549606 558 ntTSL 2 BASIC23.76■■□□□ 1.39
CLTCL1P53675 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC23.76■■□□□ 1.39
CLTCL1P53675 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC23.76■■□□□ 1.39
CLTCL1P53675 IGHV3-72-202ENST00000621503 303 ntBASIC23.76■■□□□ 1.39
CLTCL1P53675 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLTCL1P53675 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLTCL1P53675 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLTCL1P53675 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC23.76■■□□□ 1.39
CLTCL1P53675 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC23.76■■□□□ 1.39
CLTCL1P53675 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CLTCL1P53675 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CLTCL1P53675 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLTCL1P53675 AL133373.2-201ENST00000623187 2828 ntBASIC23.75■■□□□ 1.39
CLTCL1P53675 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC23.75■■□□□ 1.39
CLTCL1P53675 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC23.75■■□□□ 1.39
CLTCL1P53675 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLTCL1P53675 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
CLTCL1P53675 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLTCL1P53675 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC23.75■■□□□ 1.39
CLTCL1P53675 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLTCL1P53675 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC23.75■■□□□ 1.39
CLTCL1P53675 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLTCL1P53675 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLTCL1P53675 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
CLTCL1P53675 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLTCL1P53675 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC23.75■■□□□ 1.39
CLTCL1P53675 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC23.75■■□□□ 1.39
CLTCL1P53675 AC004233.3-201ENST00000607794 1269 ntBASIC23.75■■□□□ 1.39
CLTCL1P53675 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC23.75■■□□□ 1.39
CLTCL1P53675 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC23.75■■□□□ 1.39
CLTCL1P53675 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
CLTCL1P53675 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
CLTCL1P53675 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CLTCL1P53675 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
CLTCL1P53675 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CLTCL1P53675 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC23.75■■□□□ 1.39
CLTCL1P53675 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
CLTCL1P53675 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CLTCL1P53675 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC23.75■■□□□ 1.39
CLTCL1P53675 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC23.75■■□□□ 1.39
CLTCL1P53675 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
CLTCL1P53675 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
CLTCL1P53675 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CLTCL1P53675 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLTCL1P53675 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLTCL1P53675 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLTCL1P53675 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC23.74■■□□□ 1.39
CLTCL1P53675 AC007274.1-201ENST00000439805 662 ntBASIC23.74■■□□□ 1.39
CLTCL1P53675 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC23.74■■□□□ 1.39
CLTCL1P53675 HLA-J-202ENST00000469281 1241 ntBASIC23.74■■□□□ 1.39
CLTCL1P53675 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC23.74■■□□□ 1.39
CLTCL1P53675 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC23.74■■□□□ 1.39
CLTCL1P53675 MAX-210ENST00000555419 765 ntTSL 5 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms