Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.78■□□□□ 0.44
TUBP50607 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.78■□□□□ 0.44
TUBP50607 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TUBP50607 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.78■□□□□ 0.44
TUBP50607 AC005829.1-201ENST00000570002 483 ntBASIC17.78■□□□□ 0.44
TUBP50607 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TUBP50607 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.78■□□□□ 0.44
TUBP50607 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.78■□□□□ 0.44
TUBP50607 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.78■□□□□ 0.44
TUBP50607 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBP50607 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.78■□□□□ 0.44
TUBP50607 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TUBP50607 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TUBP50607 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBP50607 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TUBP50607 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TUBP50607 AC025580.3-201ENST00000617932 1424 ntBASIC17.78■□□□□ 0.44
TUBP50607 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TUBP50607 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBP50607 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.78■□□□□ 0.44
TUBP50607 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TUBP50607 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBP50607 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TUBP50607 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBP50607 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.78■□□□□ 0.44
TUBP50607 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TUBP50607 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TUBP50607 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TUBP50607 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.77■□□□□ 0.44
TUBP50607 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TUBP50607 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.77■□□□□ 0.44
TUBP50607 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
TUBP50607 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TUBP50607 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.77■□□□□ 0.44
TUBP50607 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TUBP50607 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TUBP50607 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.77■□□□□ 0.44
TUBP50607 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.77■□□□□ 0.44
TUBP50607 AC074386.1-202ENST00000463561 864 ntBASIC17.77■□□□□ 0.44
TUBP50607 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.77■□□□□ 0.44
TUBP50607 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.77■□□□□ 0.44
TUBP50607 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.77■□□□□ 0.44
TUBP50607 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.77■□□□□ 0.44
TUBP50607 REXO1L3P-201ENST00000622202 1288 ntBASIC17.77■□□□□ 0.44
TUBP50607 AC055717.3-201ENST00000622967 595 ntBASIC17.77■□□□□ 0.44
TUBP50607 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TUBP50607 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TUBP50607 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TUBP50607 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TUBP50607 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
TUBP50607 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TUBP50607 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
TUBP50607 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
TUBP50607 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TUBP50607 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.77■□□□□ 0.43
TUBP50607 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.77■□□□□ 0.43
TUBP50607 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
TUBP50607 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBP50607 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBP50607 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBP50607 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TUBP50607 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.76■□□□□ 0.43
TUBP50607 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBP50607 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBP50607 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.76■□□□□ 0.43
TUBP50607 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TUBP50607 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TUBP50607 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.76■□□□□ 0.43
TUBP50607 AC004967.1-201ENST00000453589 447 ntBASIC17.76■□□□□ 0.43
TUBP50607 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TUBP50607 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.76■□□□□ 0.43
TUBP50607 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.76■□□□□ 0.43
TUBP50607 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.76■□□□□ 0.43
TUBP50607 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.76■□□□□ 0.43
TUBP50607 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBP50607 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TUBP50607 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TUBP50607 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBP50607 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBP50607 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBP50607 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBP50607 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TUBP50607 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TUBP50607 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TUBP50607 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TUBP50607 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TUBP50607 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TUBP50607 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TUBP50607 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBP50607 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBP50607 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBP50607 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBP50607 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBP50607 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
TUBP50607 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBP50607 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TUBP50607 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TUBP50607 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.75■□□□□ 0.43
TUBP50607 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.75■□□□□ 0.43
TUBP50607 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms