Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2B4P23634 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2B4P23634 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
ATP2B4P23634 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
ATP2B4P23634 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2B4P23634 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2B4P23634 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2B4P23634 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC20.27■□□□□ 0.84
ATP2B4P23634 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC20.27■□□□□ 0.84
ATP2B4P23634 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2B4P23634 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC20.27■□□□□ 0.84
ATP2B4P23634 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATP2B4P23634 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC20.27■□□□□ 0.84
ATP2B4P23634 LITAF-210ENST00000571976 548 ntTSL 2 BASIC20.27■□□□□ 0.84
ATP2B4P23634 LITAF-214ENST00000574703 486 ntTSL 2 BASIC20.27■□□□□ 0.84
ATP2B4P23634 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC20.27■□□□□ 0.84
ATP2B4P23634 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.27■□□□□ 0.84
ATP2B4P23634 AC027307.3-201ENST00000594262 1100 ntBASIC20.27■□□□□ 0.84
ATP2B4P23634 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.27■□□□□ 0.84
ATP2B4P23634 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ATP2B4P23634 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
ATP2B4P23634 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ATP2B4P23634 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC20.27■□□□□ 0.83
ATP2B4P23634 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ATP2B4P23634 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B4P23634 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B4P23634 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.26■□□□□ 0.83
ATP2B4P23634 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B4P23634 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B4P23634 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B4P23634 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ATP2B4P23634 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B4P23634 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B4P23634 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ATP2B4P23634 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B4P23634 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC20.26■□□□□ 0.83
ATP2B4P23634 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B4P23634 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B4P23634 PUDP-206ENST00000540122 825 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP2B4P23634 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC20.26■□□□□ 0.83
ATP2B4P23634 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B4P23634 SPDYE22P-201ENST00000582158 798 ntBASIC20.26■□□□□ 0.83
ATP2B4P23634 AL358472.5-202ENST00000641448 1267 ntBASIC20.26■□□□□ 0.83
ATP2B4P23634 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B4P23634 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B4P23634 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP2B4P23634 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ATP2B4P23634 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B4P23634 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.26■□□□□ 0.83
ATP2B4P23634 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B4P23634 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B4P23634 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B4P23634 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B4P23634 SNX33P1-201ENST00000592116 1762 ntBASIC20.26■□□□□ 0.83
ATP2B4P23634 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP2B4P23634 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B4P23634 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B4P23634 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP2B4P23634 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B4P23634 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B4P23634 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B4P23634 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.25■□□□□ 0.83
ATP2B4P23634 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ATP2B4P23634 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B4P23634 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B4P23634 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B4P23634 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B4P23634 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B4P23634 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B4P23634 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC20.25■□□□□ 0.83
ATP2B4P23634 AC009477.1-201ENST00000452936 217 ntBASIC20.25■□□□□ 0.83
ATP2B4P23634 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B4P23634 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC20.25■□□□□ 0.83
ATP2B4P23634 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP2B4P23634 COQ9-214ENST00000567933 882 ntTSL 3 BASIC20.25■□□□□ 0.83
ATP2B4P23634 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B4P23634 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC20.25■□□□□ 0.83
ATP2B4P23634 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP2B4P23634 RN7SL828P-201ENST00000607615 303 ntBASIC20.25■□□□□ 0.83
ATP2B4P23634 AL662799.1-202ENST00000614205 422 ntBASIC20.25■□□□□ 0.83
ATP2B4P23634 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B4P23634 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
ATP2B4P23634 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B4P23634 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP2B4P23634 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ATP2B4P23634 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP2B4P23634 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B4P23634 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP2B4P23634 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20.25■□□□□ 0.83
ATP2B4P23634 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.24■□□□□ 0.83
ATP2B4P23634 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.24■□□□□ 0.83
ATP2B4P23634 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.24■□□□□ 0.83
ATP2B4P23634 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2B4P23634 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2B4P23634 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.24■□□□□ 0.83
ATP2B4P23634 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.24■□□□□ 0.83
ATP2B4P23634 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ATP2B4P23634 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ATP2B4P23634 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP2B4P23634 CETN4P-206ENST00000642099 2168 ntBASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms