Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 SPDYE21P-201ENST00000413323 827 ntBASIC15.72■□□□□ 0.11
TNFRSF1BP20333 IGHV3-47-201ENST00000425060 335 ntBASIC15.72■□□□□ 0.11
TNFRSF1BP20333 ACTG1P4-201ENST00000425123 1122 ntBASIC15.72■□□□□ 0.11
TNFRSF1BP20333 DRAXINP1-201ENST00000437611 948 ntBASIC15.72■□□□□ 0.11
TNFRSF1BP20333 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 AP002490.2-201ENST00000524791 560 ntBASIC15.72■□□□□ 0.11
TNFRSF1BP20333 AC074051.2-201ENST00000565115 352 ntBASIC15.72■□□□□ 0.11
TNFRSF1BP20333 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TNFRSF1BP20333 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 LINC00982-205ENST00000420957 435 ntBASIC15.71■□□□□ 0.11
TNFRSF1BP20333 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.71■□□□□ 0.11
TNFRSF1BP20333 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
TNFRSF1BP20333 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TNFRSF1BP20333 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
TNFRSF1BP20333 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
TNFRSF1BP20333 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TNFRSF1BP20333 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
TNFRSF1BP20333 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.71■□□□□ 0.1
TNFRSF1BP20333 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
TNFRSF1BP20333 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TNFRSF1BP20333 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TNFRSF1BP20333 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms