Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HIST1H2ABP04908 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.44■□□□□ 0.06
HIST1H2ABP04908 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST1H2ABP04908 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.44■□□□□ 0.06
HIST1H2ABP04908 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST1H2ABP04908 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HIST1H2ABP04908 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.44■□□□□ 0.06
HIST1H2ABP04908 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIST1H2ABP04908 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
HIST1H2ABP04908 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HIST1H2ABP04908 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HIST1H2ABP04908 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.43■□□□□ 0.06
HIST1H2ABP04908 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HIST1H2ABP04908 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HIST1H2ABP04908 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HIST1H2ABP04908 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HIST1H2ABP04908 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
HIST1H2ABP04908 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HIST1H2ABP04908 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HIST1H2ABP04908 RBM17P3-201ENST00000417687 1192 ntBASIC15.43■□□□□ 0.06
HIST1H2ABP04908 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.43■□□□□ 0.06
HIST1H2ABP04908 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.43■□□□□ 0.06
HIST1H2ABP04908 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.43■□□□□ 0.06
HIST1H2ABP04908 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HIST1H2ABP04908 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.43■□□□□ 0.06
HIST1H2ABP04908 AP001269.4-201ENST00000609611 512 ntBASIC15.43■□□□□ 0.06
HIST1H2ABP04908 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HIST1H2ABP04908 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HIST1H2ABP04908 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
HIST1H2ABP04908 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.43■□□□□ 0.06
HIST1H2ABP04908 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
HIST1H2ABP04908 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
HIST1H2ABP04908 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
HIST1H2ABP04908 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
HIST1H2ABP04908 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
HIST1H2ABP04908 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 BX005266.1-201ENST00000473402 457 ntBASIC15.42■□□□□ 0.06
HIST1H2ABP04908 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 AC106795.1-205ENST00000512851 1056 ntBASIC15.42■□□□□ 0.06
HIST1H2ABP04908 PRELID1P1-202ENST00000567272 903 ntBASIC15.42■□□□□ 0.06
HIST1H2ABP04908 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 MTDHP3-201ENST00000594186 672 ntBASIC15.42■□□□□ 0.06
HIST1H2ABP04908 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 AL022326.1-202ENST00000641533 845 ntBASIC15.42■□□□□ 0.06
HIST1H2ABP04908 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 UBALD1-205ENST00000590891 2641 ntBASIC15.42■□□□□ 0.06
HIST1H2ABP04908 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 NCF1C-201ENST00000438382 1427 ntBASIC15.42■□□□□ 0.06
HIST1H2ABP04908 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H2ABP04908 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H2ABP04908 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H2ABP04908 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.41■□□□□ 0.06
HIST1H2ABP04908 PCDH8P1-201ENST00000428983 2773 ntBASIC15.41■□□□□ 0.06
HIST1H2ABP04908 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H2ABP04908 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.41■□□□□ 0.06
HIST1H2ABP04908 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.41■□□□□ 0.06
HIST1H2ABP04908 AGGF1P2-201ENST00000426656 2106 ntBASIC15.41■□□□□ 0.06
HIST1H2ABP04908 AC004817.3-201ENST00000602957 2129 ntBASIC15.41■□□□□ 0.06
HIST1H2ABP04908 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
HIST1H2ABP04908 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H2ABP04908 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H2ABP04908 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H2ABP04908 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.41■□□□□ 0.06
HIST1H2ABP04908 AL356309.3-201ENST00000624132 1934 ntBASIC15.41■□□□□ 0.06
HIST1H2ABP04908 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.41■□□□□ 0.06
HIST1H2ABP04908 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HIST1H2ABP04908 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
HIST1H2ABP04908 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H2ABP04908 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H2ABP04908 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
HIST1H2ABP04908 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.41■□□□□ 0.06
HIST1H2ABP04908 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H2ABP04908 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H2ABP04908 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms