Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.13■□□□□ 0.49
HLA-DRAP01903 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.13■□□□□ 0.49
HLA-DRAP01903 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.13■□□□□ 0.49
HLA-DRAP01903 AC096734.2-201ENST00000562054 433 ntBASIC18.13■□□□□ 0.49
HLA-DRAP01903 AC018845.2-201ENST00000568326 409 ntBASIC18.13■□□□□ 0.49
HLA-DRAP01903 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.13■□□□□ 0.49
HLA-DRAP01903 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HLA-DRAP01903 CYP2A7P1-201ENST00000595391 815 ntBASIC18.13■□□□□ 0.49
HLA-DRAP01903 AC140113.2-201ENST00000604370 208 ntBASIC18.13■□□□□ 0.49
HLA-DRAP01903 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DRAP01903 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DRAP01903 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DRAP01903 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.13■□□□□ 0.49
HLA-DRAP01903 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.13■□□□□ 0.49
HLA-DRAP01903 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DRAP01903 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.13■□□□□ 0.49
HLA-DRAP01903 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DRAP01903 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DRAP01903 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
HLA-DRAP01903 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DRAP01903 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DRAP01903 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.13■□□□□ 0.49
HLA-DRAP01903 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HLA-DRAP01903 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.13■□□□□ 0.49
HLA-DRAP01903 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.13■□□□□ 0.49
HLA-DRAP01903 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
HLA-DRAP01903 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DRAP01903 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.12■□□□□ 0.49
HLA-DRAP01903 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HLA-DRAP01903 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
HLA-DRAP01903 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
HLA-DRAP01903 AC092171.3-201ENST00000610122 2651 ntBASIC18.12■□□□□ 0.49
HLA-DRAP01903 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
HLA-DRAP01903 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DRAP01903 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HLA-DRAP01903 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DRAP01903 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DRAP01903 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DRAP01903 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
HLA-DRAP01903 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HLA-DRAP01903 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DRAP01903 RHOQP3-201ENST00000437982 621 ntBASIC18.12■□□□□ 0.49
HLA-DRAP01903 AL513480.1-201ENST00000451731 511 ntBASIC18.12■□□□□ 0.49
HLA-DRAP01903 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.12■□□□□ 0.49
HLA-DRAP01903 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.12■□□□□ 0.49
HLA-DRAP01903 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.12■□□□□ 0.49
HLA-DRAP01903 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.12■□□□□ 0.49
HLA-DRAP01903 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
HLA-DRAP01903 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
HLA-DRAP01903 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.12■□□□□ 0.49
HLA-DRAP01903 AC087641.1-201ENST00000557561 1021 ntBASIC18.12■□□□□ 0.49
HLA-DRAP01903 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DRAP01903 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.12■□□□□ 0.49
HLA-DRAP01903 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DRAP01903 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
HLA-DRAP01903 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.12■□□□□ 0.49
HLA-DRAP01903 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DRAP01903 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.12■□□□□ 0.49
HLA-DRAP01903 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DRAP01903 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HLA-DRAP01903 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.12■□□□□ 0.49
HLA-DRAP01903 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
HLA-DRAP01903 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.12■□□□□ 0.49
HLA-DRAP01903 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.12■□□□□ 0.49
HLA-DRAP01903 HLA-A-202ENST00000376806 1854 ntBASIC18.12■□□□□ 0.49
HLA-DRAP01903 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.11■□□□□ 0.49
HLA-DRAP01903 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DRAP01903 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DRAP01903 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DRAP01903 AL671710.1-201ENST00000610245 2349 ntBASIC18.11■□□□□ 0.49
HLA-DRAP01903 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DRAP01903 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HLA-DRAP01903 UBALD1-205ENST00000590891 2641 ntBASIC18.11■□□□□ 0.49
HLA-DRAP01903 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
HLA-DRAP01903 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DRAP01903 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.11■□□□□ 0.49
HLA-DRAP01903 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DRAP01903 HCG4-201ENST00000418983 998 ntBASIC18.11■□□□□ 0.49
HLA-DRAP01903 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DRAP01903 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.11■□□□□ 0.49
HLA-DRAP01903 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.11■□□□□ 0.49
HLA-DRAP01903 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.11■□□□□ 0.49
HLA-DRAP01903 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DRAP01903 AC027601.4-201ENST00000611259 610 ntBASIC18.11■□□□□ 0.49
HLA-DRAP01903 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DRAP01903 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DRAP01903 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
HLA-DRAP01903 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DRAP01903 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DRAP01903 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DRAP01903 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DRAP01903 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DRAP01903 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.11■□□□□ 0.49
HLA-DRAP01903 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
HLA-DRAP01903 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DRAP01903 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
HLA-DRAP01903 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DRAP01903 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DRAP01903 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DRAP01903 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms