Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.65■□□□□ 0.42
BEST1O76090 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST1O76090 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.65■□□□□ 0.42
BEST1O76090 DNAJB3-202ENST00000449667 1266 ntBASIC17.65■□□□□ 0.42
BEST1O76090 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.65■□□□□ 0.42
BEST1O76090 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
BEST1O76090 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.65■□□□□ 0.42
BEST1O76090 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.65■□□□□ 0.42
BEST1O76090 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
BEST1O76090 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
BEST1O76090 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.65■□□□□ 0.42
BEST1O76090 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
BEST1O76090 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BEST1O76090 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
BEST1O76090 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST1O76090 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BEST1O76090 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.65■□□□□ 0.42
BEST1O76090 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST1O76090 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.65■□□□□ 0.42
BEST1O76090 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.65■□□□□ 0.42
BEST1O76090 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.65■□□□□ 0.42
BEST1O76090 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
BEST1O76090 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BEST1O76090 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
BEST1O76090 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.64■□□□□ 0.42
BEST1O76090 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
BEST1O76090 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.64■□□□□ 0.42
BEST1O76090 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.64■□□□□ 0.42
BEST1O76090 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
BEST1O76090 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
BEST1O76090 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
BEST1O76090 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
BEST1O76090 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BEST1O76090 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST1O76090 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST1O76090 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BEST1O76090 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.64■□□□□ 0.41
BEST1O76090 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
BEST1O76090 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.64■□□□□ 0.41
BEST1O76090 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.64■□□□□ 0.41
BEST1O76090 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
BEST1O76090 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST1O76090 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST1O76090 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
BEST1O76090 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST1O76090 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BEST1O76090 AL355306.1-201ENST00000415580 579 ntBASIC17.64■□□□□ 0.41
BEST1O76090 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
BEST1O76090 AC109635.5-201ENST00000533593 962 ntBASIC17.64■□□□□ 0.41
BEST1O76090 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.64■□□□□ 0.41
BEST1O76090 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.64■□□□□ 0.41
BEST1O76090 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.64■□□□□ 0.41
BEST1O76090 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.64■□□□□ 0.41
BEST1O76090 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST1O76090 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.64■□□□□ 0.41
BEST1O76090 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.64■□□□□ 0.41
BEST1O76090 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BEST1O76090 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
BEST1O76090 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BEST1O76090 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST1O76090 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BEST1O76090 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.64■□□□□ 0.41
BEST1O76090 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST1O76090 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BEST1O76090 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
BEST1O76090 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST1O76090 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST1O76090 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
BEST1O76090 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BEST1O76090 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
BEST1O76090 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BEST1O76090 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BEST1O76090 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.63■□□□□ 0.41
BEST1O76090 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
BEST1O76090 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
BEST1O76090 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BEST1O76090 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
BEST1O76090 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BEST1O76090 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BEST1O76090 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.63■□□□□ 0.41
BEST1O76090 AL671277.1-201ENST00000429656 993 ntBASIC17.63■□□□□ 0.41
BEST1O76090 AP006288.1-201ENST00000446065 395 ntBASIC17.63■□□□□ 0.41
BEST1O76090 ACTG1P14-201ENST00000446382 1122 ntBASIC17.63■□□□□ 0.41
BEST1O76090 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.63■□□□□ 0.41
BEST1O76090 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BEST1O76090 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
BEST1O76090 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.63■□□□□ 0.41
BEST1O76090 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.63■□□□□ 0.41
BEST1O76090 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.63■□□□□ 0.41
BEST1O76090 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.63■□□□□ 0.41
BEST1O76090 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.63■□□□□ 0.41
BEST1O76090 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.63■□□□□ 0.41
BEST1O76090 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.63■□□□□ 0.41
BEST1O76090 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.63■□□□□ 0.41
BEST1O76090 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BEST1O76090 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.63■□□□□ 0.41
BEST1O76090 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
BEST1O76090 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.63■□□□□ 0.41
BEST1O76090 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
BEST1O76090 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms