Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE3O75131 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CPNE3O75131 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CPNE3O75131 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.24■□□□□ 0.19
CPNE3O75131 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.24■□□□□ 0.19
CPNE3O75131 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.24■□□□□ 0.19
CPNE3O75131 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.24■□□□□ 0.19
CPNE3O75131 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE3O75131 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE3O75131 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CPNE3O75131 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE3O75131 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE3O75131 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.24■□□□□ 0.19
CPNE3O75131 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CPNE3O75131 AC254562.1-201ENST00000417586 456 ntBASIC16.24■□□□□ 0.19
CPNE3O75131 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
CPNE3O75131 PMS2P2-201ENST00000425039 1128 ntBASIC16.24■□□□□ 0.19
CPNE3O75131 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.24■□□□□ 0.19
CPNE3O75131 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE3O75131 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.24■□□□□ 0.19
CPNE3O75131 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.24■□□□□ 0.19
CPNE3O75131 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.24■□□□□ 0.19
CPNE3O75131 AL596442.2-201ENST00000610240 980 ntBASIC16.24■□□□□ 0.19
CPNE3O75131 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE3O75131 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE3O75131 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE3O75131 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE3O75131 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE3O75131 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.24■□□□□ 0.19
CPNE3O75131 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.24■□□□□ 0.19
CPNE3O75131 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.24■□□□□ 0.19
CPNE3O75131 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE3O75131 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE3O75131 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CPNE3O75131 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE3O75131 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CPNE3O75131 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE3O75131 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE3O75131 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE3O75131 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CPNE3O75131 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE3O75131 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE3O75131 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE3O75131 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CPNE3O75131 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE3O75131 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.23■□□□□ 0.19
CPNE3O75131 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE3O75131 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE3O75131 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE3O75131 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE3O75131 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.23■□□□□ 0.19
CPNE3O75131 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.23■□□□□ 0.19
CPNE3O75131 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE3O75131 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE3O75131 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.23■□□□□ 0.19
CPNE3O75131 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.23■□□□□ 0.19
CPNE3O75131 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.23■□□□□ 0.19
CPNE3O75131 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.23■□□□□ 0.19
CPNE3O75131 FAM185BP-201ENST00000443595 716 ntBASIC16.23■□□□□ 0.19
CPNE3O75131 ACTG1P14-201ENST00000446382 1122 ntBASIC16.23■□□□□ 0.19
CPNE3O75131 CEND1P1-201ENST00000451006 455 ntBASIC16.23■□□□□ 0.19
CPNE3O75131 AC087163.2-201ENST00000457299 853 ntBASIC16.23■□□□□ 0.19
CPNE3O75131 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.23■□□□□ 0.19
CPNE3O75131 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE3O75131 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.23■□□□□ 0.19
CPNE3O75131 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE3O75131 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.23■□□□□ 0.19
CPNE3O75131 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE3O75131 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE3O75131 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE3O75131 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE3O75131 AC133963.1-201ENST00000504166 1679 ntBASIC16.23■□□□□ 0.19
CPNE3O75131 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.23■□□□□ 0.19
CPNE3O75131 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE3O75131 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CPNE3O75131 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CPNE3O75131 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.23■□□□□ 0.19
CPNE3O75131 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE3O75131 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CPNE3O75131 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.23■□□□□ 0.19
CPNE3O75131 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE3O75131 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.23■□□□□ 0.19
CPNE3O75131 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE3O75131 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.23■□□□□ 0.19
CPNE3O75131 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE3O75131 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE3O75131 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE3O75131 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CPNE3O75131 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.22■□□□□ 0.19
CPNE3O75131 AC129492.6-201ENST00000611383 1305 ntBASIC16.22■□□□□ 0.19
CPNE3O75131 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CPNE3O75131 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.22■□□□□ 0.19
CPNE3O75131 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CPNE3O75131 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CPNE3O75131 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CPNE3O75131 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE3O75131 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CPNE3O75131 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE3O75131 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CPNE3O75131 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms