Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.06■□□□□ 0.32
KDELR3O43731 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.06■□□□□ 0.32
KDELR3O43731 AC109635.5-201ENST00000533593 962 ntBASIC17.06■□□□□ 0.32
KDELR3O43731 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.06■□□□□ 0.32
KDELR3O43731 AC005829.1-201ENST00000570002 483 ntBASIC17.06■□□□□ 0.32
KDELR3O43731 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KDELR3O43731 AD000864.1-201ENST00000624076 2295 ntBASIC17.06■□□□□ 0.32
KDELR3O43731 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KDELR3O43731 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KDELR3O43731 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.06■□□□□ 0.32
KDELR3O43731 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
KDELR3O43731 AC106886.4-201ENST00000623557 2502 ntBASIC17.06■□□□□ 0.32
KDELR3O43731 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KDELR3O43731 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
KDELR3O43731 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
KDELR3O43731 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.06■□□□□ 0.32
KDELR3O43731 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
KDELR3O43731 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
KDELR3O43731 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KDELR3O43731 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KDELR3O43731 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KDELR3O43731 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KDELR3O43731 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
KDELR3O43731 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KDELR3O43731 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KDELR3O43731 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KDELR3O43731 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KDELR3O43731 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.05■□□□□ 0.32
KDELR3O43731 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.05■□□□□ 0.32
KDELR3O43731 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.05■□□□□ 0.32
KDELR3O43731 HTR5BP-201ENST00000430851 1154 ntBASIC17.05■□□□□ 0.32
KDELR3O43731 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.05■□□□□ 0.32
KDELR3O43731 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.05■□□□□ 0.32
KDELR3O43731 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.05■□□□□ 0.32
KDELR3O43731 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.05■□□□□ 0.32
KDELR3O43731 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KDELR3O43731 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
KDELR3O43731 AL078644.1-201ENST00000609881 752 ntBASIC17.05■□□□□ 0.32
KDELR3O43731 AC092902.6-201ENST00000641783 218 ntBASIC17.05■□□□□ 0.32
KDELR3O43731 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KDELR3O43731 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
KDELR3O43731 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.05■□□□□ 0.32
KDELR3O43731 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
KDELR3O43731 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KDELR3O43731 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KDELR3O43731 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KDELR3O43731 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
KDELR3O43731 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KDELR3O43731 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KDELR3O43731 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
KDELR3O43731 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KDELR3O43731 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KDELR3O43731 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.05■□□□□ 0.32
KDELR3O43731 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KDELR3O43731 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KDELR3O43731 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KDELR3O43731 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.05■□□□□ 0.32
KDELR3O43731 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KDELR3O43731 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KDELR3O43731 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
KDELR3O43731 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KDELR3O43731 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
KDELR3O43731 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KDELR3O43731 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.04■□□□□ 0.32
KDELR3O43731 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KDELR3O43731 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
KDELR3O43731 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.04■□□□□ 0.32
KDELR3O43731 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.04■□□□□ 0.32
KDELR3O43731 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
KDELR3O43731 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
KDELR3O43731 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KDELR3O43731 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
KDELR3O43731 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KDELR3O43731 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.04■□□□□ 0.32
KDELR3O43731 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KDELR3O43731 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.04■□□□□ 0.32
KDELR3O43731 ALG1L5P-201ENST00000482043 771 ntBASIC17.04■□□□□ 0.32
KDELR3O43731 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
KDELR3O43731 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
KDELR3O43731 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.04■□□□□ 0.32
KDELR3O43731 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KDELR3O43731 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.04■□□□□ 0.32
KDELR3O43731 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
KDELR3O43731 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.04■□□□□ 0.32
KDELR3O43731 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.04■□□□□ 0.32
KDELR3O43731 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
KDELR3O43731 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KDELR3O43731 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
KDELR3O43731 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
KDELR3O43731 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KDELR3O43731 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
KDELR3O43731 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KDELR3O43731 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KDELR3O43731 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KDELR3O43731 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.04■□□□□ 0.32
KDELR3O43731 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KDELR3O43731 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KDELR3O43731 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
KDELR3O43731 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KDELR3O43731 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms