Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CUEDC1Q9NWM3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 AC107918.2-201ENST00000530817 355 ntBASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 AC034105.1-201ENST00000563488 319 ntBASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 MIR3197-201ENST00000582241 73 ntBASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.35■□□□□ 0.21
CUEDC1Q9NWM3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 AL121761.2-201ENST00000598007 1648 ntBASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 AC106886.4-201ENST00000623557 2502 ntBASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 AC040169.1-201ENST00000565382 521 ntBASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 AC010327.4-202ENST00000591484 748 ntBASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 REXO1L3P-201ENST00000622202 1288 ntBASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
CUEDC1Q9NWM3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.33■□□□□ 0.21
CUEDC1Q9NWM3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.33■□□□□ 0.21
CUEDC1Q9NWM3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.33■□□□□ 0.21
CUEDC1Q9NWM3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CUEDC1Q9NWM3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.33■□□□□ 0.2
CUEDC1Q9NWM3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CUEDC1Q9NWM3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CUEDC1Q9NWM3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CUEDC1Q9NWM3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CUEDC1Q9NWM3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CUEDC1Q9NWM3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.33■□□□□ 0.2
CUEDC1Q9NWM3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CUEDC1Q9NWM3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.33■□□□□ 0.2
CUEDC1Q9NWM3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.33■□□□□ 0.2
CUEDC1Q9NWM3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CUEDC1Q9NWM3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.33■□□□□ 0.2
CUEDC1Q9NWM3 AC010654.1-201ENST00000615722 808 ntBASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms