Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 NUS1P2-201ENST00000417358 873 ntBASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 KRT16P4-201ENST00000453883 522 ntBASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 LINC01711-201ENST00000598340 967 ntBASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 AC138894.3-201ENST00000603787 634 ntBASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 AC006449.5-201ENST00000610658 2098 ntBASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 AC009336.1-201ENST00000608941 1553 ntBASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LIN7CQ9NUP9 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
LIN7CQ9NUP9 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LIN7CQ9NUP9 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
LIN7CQ9NUP9 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LIN7CQ9NUP9 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LIN7CQ9NUP9 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LIN7CQ9NUP9 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
LIN7CQ9NUP9 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 AC003669.1-201ENST00000334569 611 ntBASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 FOSL1P1-201ENST00000511041 816 ntBASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 STK19B-204ENST00000512515 211 ntBASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
LIN7CQ9NUP9 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 AL135999.2-201ENST00000622438 1686 ntBASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 KRT8P10-201ENST00000450021 1447 ntBASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 PCDH8P1-201ENST00000428983 2773 ntBASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 FRMD8P1-201ENST00000440433 1524 ntBASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
LIN7CQ9NUP9 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms