Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 MRPL20P1-201ENST00000400819 433 ntBASIC14.8□□□□□ -0.04
CDH20Q9HBT6 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 RNA5SP415-201ENST00000517246 115 ntBASIC14.8□□□□□ -0.04
CDH20Q9HBT6 IGHV3-65-201ENST00000523210 341 ntBASIC14.8□□□□□ -0.04
CDH20Q9HBT6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 IL9RP2-201ENST00000423948 1312 ntBASIC14.8□□□□□ -0.04
CDH20Q9HBT6 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CDH20Q9HBT6 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 FRMD8P1-201ENST00000440433 1524 ntBASIC14.79□□□□□ -0.04
CDH20Q9HBT6 AC108073.2-201ENST00000464002 357 ntBASIC14.79□□□□□ -0.04
CDH20Q9HBT6 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 UNC93B6-202ENST00000528242 690 ntBASIC14.79□□□□□ -0.04
CDH20Q9HBT6 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 AL021920.2-201ENST00000624828 1351 ntBASIC14.79□□□□□ -0.04
CDH20Q9HBT6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CDH20Q9HBT6 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH20Q9HBT6 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH20Q9HBT6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CDH20Q9HBT6 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.78□□□□□ -0.04
CDH20Q9HBT6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH20Q9HBT6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CDH20Q9HBT6 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH20Q9HBT6 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.78□□□□□ -0.04
CDH20Q9HBT6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH20Q9HBT6 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH20Q9HBT6 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CDH20Q9HBT6 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.78□□□□□ -0.04
CDH20Q9HBT6 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.78□□□□□ -0.04
CDH20Q9HBT6 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CDH20Q9HBT6 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.78□□□□□ -0.04
CDH20Q9HBT6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH20Q9HBT6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CDH20Q9HBT6 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CDH20Q9HBT6 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms