Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BRF2Q9HAW0 UBALD1-205ENST00000590891 2641 ntBASIC16.15■□□□□ 0.18
BRF2Q9HAW0 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
BRF2Q9HAW0 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.14■□□□□ 0.18
BRF2Q9HAW0 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
BRF2Q9HAW0 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
BRF2Q9HAW0 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BRF2Q9HAW0 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BRF2Q9HAW0 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BRF2Q9HAW0 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
BRF2Q9HAW0 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
BRF2Q9HAW0 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
BRF2Q9HAW0 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BRF2Q9HAW0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
BRF2Q9HAW0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.14■□□□□ 0.17
BRF2Q9HAW0 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
BRF2Q9HAW0 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
BRF2Q9HAW0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.14■□□□□ 0.17
BRF2Q9HAW0 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.14■□□□□ 0.17
BRF2Q9HAW0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.14■□□□□ 0.17
BRF2Q9HAW0 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.14■□□□□ 0.17
BRF2Q9HAW0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.14■□□□□ 0.17
BRF2Q9HAW0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.14■□□□□ 0.17
BRF2Q9HAW0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.14■□□□□ 0.17
BRF2Q9HAW0 AL121912.1-201ENST00000603683 238 ntBASIC16.14■□□□□ 0.17
BRF2Q9HAW0 AC008735.5-201ENST00000623544 497 ntBASIC16.14■□□□□ 0.17
BRF2Q9HAW0 PGM5P2-202ENST00000637225 1043 ntBASIC16.14■□□□□ 0.17
BRF2Q9HAW0 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
BRF2Q9HAW0 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
BRF2Q9HAW0 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.14■□□□□ 0.17
BRF2Q9HAW0 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BRF2Q9HAW0 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.14■□□□□ 0.17
BRF2Q9HAW0 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
BRF2Q9HAW0 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BRF2Q9HAW0 AC129492.6-201ENST00000611383 1305 ntBASIC16.14■□□□□ 0.17
BRF2Q9HAW0 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
BRF2Q9HAW0 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BRF2Q9HAW0 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
BRF2Q9HAW0 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BRF2Q9HAW0 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
BRF2Q9HAW0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BRF2Q9HAW0 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
BRF2Q9HAW0 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
BRF2Q9HAW0 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.13■□□□□ 0.17
BRF2Q9HAW0 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.13■□□□□ 0.17
BRF2Q9HAW0 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.13■□□□□ 0.17
BRF2Q9HAW0 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BRF2Q9HAW0 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BRF2Q9HAW0 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.13■□□□□ 0.17
BRF2Q9HAW0 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.13■□□□□ 0.17
BRF2Q9HAW0 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BRF2Q9HAW0 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.13■□□□□ 0.17
BRF2Q9HAW0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BRF2Q9HAW0 RPS2P28-201ENST00000314255 741 ntBASIC16.13■□□□□ 0.17
BRF2Q9HAW0 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BRF2Q9HAW0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.13■□□□□ 0.17
BRF2Q9HAW0 AC018712.1-201ENST00000455767 687 ntBASIC16.13■□□□□ 0.17
BRF2Q9HAW0 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.13■□□□□ 0.17
BRF2Q9HAW0 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.13■□□□□ 0.17
BRF2Q9HAW0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.13■□□□□ 0.17
BRF2Q9HAW0 AC008667.4-201ENST00000607370 168 ntBASIC16.13■□□□□ 0.17
BRF2Q9HAW0 MIR1199-201ENST00000621445 119 ntBASIC16.13■□□□□ 0.17
BRF2Q9HAW0 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BRF2Q9HAW0 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.13■□□□□ 0.17
BRF2Q9HAW0 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BRF2Q9HAW0 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.13■□□□□ 0.17
BRF2Q9HAW0 AC131009.4-201ENST00000624048 1740 ntBASIC16.13■□□□□ 0.17
BRF2Q9HAW0 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.13■□□□□ 0.17
BRF2Q9HAW0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.13■□□□□ 0.17
BRF2Q9HAW0 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BRF2Q9HAW0 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
BRF2Q9HAW0 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.13■□□□□ 0.17
BRF2Q9HAW0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BRF2Q9HAW0 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
BRF2Q9HAW0 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
BRF2Q9HAW0 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.12■□□□□ 0.17
BRF2Q9HAW0 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.12■□□□□ 0.17
BRF2Q9HAW0 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BRF2Q9HAW0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.12■□□□□ 0.17
BRF2Q9HAW0 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.12■□□□□ 0.17
BRF2Q9HAW0 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BRF2Q9HAW0 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BRF2Q9HAW0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
BRF2Q9HAW0 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.12■□□□□ 0.17
BRF2Q9HAW0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BRF2Q9HAW0 AL353732.1-201ENST00000569618 1459 ntBASIC16.12■□□□□ 0.17
BRF2Q9HAW0 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BRF2Q9HAW0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
BRF2Q9HAW0 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.12■□□□□ 0.17
BRF2Q9HAW0 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BRF2Q9HAW0 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms