Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
UPF2Q9HAU5 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UPF2Q9HAU5 MYB-242ENST00000618728 3545 ntTSL 5 BASIC20.79■□□□□ 0.92
UPF2Q9HAU5 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
UPF2Q9HAU5 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UPF2Q9HAU5 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.79■□□□□ 0.92
UPF2Q9HAU5 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UPF2Q9HAU5 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC20.79■□□□□ 0.92
UPF2Q9HAU5 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC20.79■□□□□ 0.92
UPF2Q9HAU5 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
UPF2Q9HAU5 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UPF2Q9HAU5 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UPF2Q9HAU5 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UPF2Q9HAU5 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
UPF2Q9HAU5 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC20.79■□□□□ 0.92
UPF2Q9HAU5 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UPF2Q9HAU5 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
UPF2Q9HAU5 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.79■□□□□ 0.92
UPF2Q9HAU5 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.79■□□□□ 0.92
UPF2Q9HAU5 AL138831.2-201ENST00000606564 490 ntBASIC20.79■□□□□ 0.92
UPF2Q9HAU5 PAUPAR-201ENST00000630360 2965 ntBASIC20.79■□□□□ 0.92
UPF2Q9HAU5 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
UPF2Q9HAU5 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.79■□□□□ 0.92
UPF2Q9HAU5 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
UPF2Q9HAU5 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
UPF2Q9HAU5 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
UPF2Q9HAU5 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
UPF2Q9HAU5 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
UPF2Q9HAU5 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
UPF2Q9HAU5 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
UPF2Q9HAU5 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UPF2Q9HAU5 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
UPF2Q9HAU5 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC20.79■□□□□ 0.92
UPF2Q9HAU5 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UPF2Q9HAU5 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPF2Q9HAU5 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.78■□□□□ 0.92
UPF2Q9HAU5 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPF2Q9HAU5 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPF2Q9HAU5 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPF2Q9HAU5 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC20.78■□□□□ 0.92
UPF2Q9HAU5 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
UPF2Q9HAU5 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPF2Q9HAU5 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPF2Q9HAU5 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UPF2Q9HAU5 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPF2Q9HAU5 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPF2Q9HAU5 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.78■□□□□ 0.92
UPF2Q9HAU5 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UPF2Q9HAU5 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPF2Q9HAU5 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPF2Q9HAU5 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UPF2Q9HAU5 KLF4P1-201ENST00000412782 1185 ntBASIC20.78■□□□□ 0.92
UPF2Q9HAU5 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.78■□□□□ 0.92
UPF2Q9HAU5 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.78■□□□□ 0.92
UPF2Q9HAU5 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UPF2Q9HAU5 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.78■□□□□ 0.92
UPF2Q9HAU5 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPF2Q9HAU5 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPF2Q9HAU5 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPF2Q9HAU5 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPF2Q9HAU5 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UPF2Q9HAU5 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UPF2Q9HAU5 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
UPF2Q9HAU5 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.78■□□□□ 0.92
UPF2Q9HAU5 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UPF2Q9HAU5 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UPF2Q9HAU5 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
UPF2Q9HAU5 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UPF2Q9HAU5 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
UPF2Q9HAU5 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UPF2Q9HAU5 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.77■□□□□ 0.92
UPF2Q9HAU5 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
UPF2Q9HAU5 MTHFR-217ENST00000641820 1569 ntBASIC20.77■□□□□ 0.92
UPF2Q9HAU5 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
UPF2Q9HAU5 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC20.77■□□□□ 0.92
UPF2Q9HAU5 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
UPF2Q9HAU5 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UPF2Q9HAU5 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.77■□□□□ 0.92
UPF2Q9HAU5 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
UPF2Q9HAU5 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.92
UPF2Q9HAU5 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
UPF2Q9HAU5 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
UPF2Q9HAU5 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
UPF2Q9HAU5 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.77■□□□□ 0.92
UPF2Q9HAU5 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
UPF2Q9HAU5 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UPF2Q9HAU5 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UPF2Q9HAU5 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.77■□□□□ 0.92
UPF2Q9HAU5 TMEM191A-211ENST00000637163 1067 ntBASIC20.77■□□□□ 0.92
UPF2Q9HAU5 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
UPF2Q9HAU5 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
UPF2Q9HAU5 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UPF2Q9HAU5 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.77■□□□□ 0.92
UPF2Q9HAU5 AC105917.1-201ENST00000506637 2539 ntBASIC20.77■□□□□ 0.92
UPF2Q9HAU5 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UPF2Q9HAU5 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UPF2Q9HAU5 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UPF2Q9HAU5 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.77■□□□□ 0.92
UPF2Q9HAU5 AMT-206ENST00000458307 1860 ntTSL 2 BASIC20.77■□□□□ 0.92
UPF2Q9HAU5 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms