Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 AC008738.7-201ENST00000609744 511 ntBASIC18.34■□□□□ 0.53
HIPK3Q9H422 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
HIPK3Q9H422 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIPK3Q9H422 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIPK3Q9H422 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIPK3Q9H422 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIPK3Q9H422 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIPK3Q9H422 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.34■□□□□ 0.53
HIPK3Q9H422 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.34■□□□□ 0.53
HIPK3Q9H422 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIPK3Q9H422 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HIPK3Q9H422 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.34■□□□□ 0.53
HIPK3Q9H422 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIPK3Q9H422 AC104581.1-202ENST00000635932 2618 ntBASIC18.34■□□□□ 0.53
HIPK3Q9H422 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
HIPK3Q9H422 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.33■□□□□ 0.53
HIPK3Q9H422 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HIPK3Q9H422 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HIPK3Q9H422 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HIPK3Q9H422 AC012317.2-201ENST00000623305 2251 ntBASIC18.33■□□□□ 0.53
HIPK3Q9H422 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.33■□□□□ 0.53
HIPK3Q9H422 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
HIPK3Q9H422 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HIPK3Q9H422 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HIPK3Q9H422 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HIPK3Q9H422 AL353705.2-201ENST00000428243 662 ntBASIC18.33■□□□□ 0.52
HIPK3Q9H422 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HIPK3Q9H422 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.33■□□□□ 0.52
HIPK3Q9H422 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.33■□□□□ 0.52
HIPK3Q9H422 IGHV3-71-201ENST00000523324 359 ntBASIC18.33■□□□□ 0.52
HIPK3Q9H422 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.33■□□□□ 0.52
HIPK3Q9H422 AC009407.1-201ENST00000568958 598 ntBASIC18.33■□□□□ 0.52
HIPK3Q9H422 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HIPK3Q9H422 CYP2A7P1-201ENST00000595391 815 ntBASIC18.33■□□□□ 0.52
HIPK3Q9H422 LINC00896-202ENST00000609602 2128 ntBASIC18.33■□□□□ 0.52
HIPK3Q9H422 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.33■□□□□ 0.52
HIPK3Q9H422 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HIPK3Q9H422 TEX28P1-201ENST00000613479 1221 ntBASIC18.33■□□□□ 0.52
HIPK3Q9H422 TEX28P2-201ENST00000617764 1221 ntBASIC18.33■□□□□ 0.52
HIPK3Q9H422 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
HIPK3Q9H422 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.33■□□□□ 0.52
HIPK3Q9H422 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HIPK3Q9H422 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
HIPK3Q9H422 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HIPK3Q9H422 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.33■□□□□ 0.52
HIPK3Q9H422 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HIPK3Q9H422 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
HIPK3Q9H422 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
HIPK3Q9H422 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
HIPK3Q9H422 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.33■□□□□ 0.52
HIPK3Q9H422 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.33■□□□□ 0.52
HIPK3Q9H422 AC138969.3-201ENST00000546612 1459 ntBASIC18.33■□□□□ 0.52
HIPK3Q9H422 AC138932.2-201ENST00000548268 1459 ntBASIC18.33■□□□□ 0.52
HIPK3Q9H422 AC126755.4-201ENST00000549796 1459 ntBASIC18.33■□□□□ 0.52
HIPK3Q9H422 AL355312.1-201ENST00000407115 2176 ntBASIC18.32■□□□□ 0.52
HIPK3Q9H422 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIPK3Q9H422 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
HIPK3Q9H422 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HIPK3Q9H422 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HIPK3Q9H422 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HIPK3Q9H422 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIPK3Q9H422 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIPK3Q9H422 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIPK3Q9H422 AC087499.5-201ENST00000452760 1342 ntBASIC18.32■□□□□ 0.52
HIPK3Q9H422 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.32■□□□□ 0.52
HIPK3Q9H422 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HIPK3Q9H422 LINC00895-201ENST00000629028 1637 ntBASIC18.32■□□□□ 0.52
HIPK3Q9H422 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.32■□□□□ 0.52
HIPK3Q9H422 ABALON-201ENST00000629058 1903 ntBASIC18.32■□□□□ 0.52
HIPK3Q9H422 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIPK3Q9H422 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HIPK3Q9H422 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HIPK3Q9H422 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.32■□□□□ 0.52
HIPK3Q9H422 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.32■□□□□ 0.52
HIPK3Q9H422 AC140912.1-201ENST00000577171 1054 ntBASIC18.32■□□□□ 0.52
HIPK3Q9H422 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.32■□□□□ 0.52
HIPK3Q9H422 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HIPK3Q9H422 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.32■□□□□ 0.52
HIPK3Q9H422 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.32■□□□□ 0.52
HIPK3Q9H422 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.32■□□□□ 0.52
HIPK3Q9H422 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIPK3Q9H422 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HIPK3Q9H422 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIPK3Q9H422 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
HIPK3Q9H422 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIPK3Q9H422 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HIPK3Q9H422 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.32■□□□□ 0.52
HIPK3Q9H422 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HIPK3Q9H422 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIPK3Q9H422 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.32■□□□□ 0.52
HIPK3Q9H422 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HIPK3Q9H422 AC138932.1-201ENST00000534164 6830 ntBASIC18.32■□□□□ 0.52
HIPK3Q9H422 AL390961.4-201ENST00000623958 2535 ntBASIC18.31■□□□□ 0.52
HIPK3Q9H422 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIPK3Q9H422 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIPK3Q9H422 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIPK3Q9H422 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HIPK3Q9H422 CETN4P-206ENST00000642099 2168 ntBASIC18.31■□□□□ 0.52
HIPK3Q9H422 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
HIPK3Q9H422 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms