Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 RPSAP43-201ENST00000402237 625 ntBASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 FAM185BP-201ENST00000443595 716 ntBASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 AC025580.3-201ENST00000617932 1424 ntBASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP3Q9BWW4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 CROCCP2-202ENST00000412962 2773 ntBASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP3Q9BWW4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 AC108860.2-201ENST00000562760 2183 ntBASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 ACTL9-202ENST00000612068 1252 ntBASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP3Q9BWW4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms