Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CDCA3Q99618 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDCA3Q99618 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.38■□□□□ 0.37
CDCA3Q99618 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.38■□□□□ 0.37
CDCA3Q99618 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDCA3Q99618 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CDCA3Q99618 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDCA3Q99618 AC079776.1-201ENST00000401540 1152 ntBASIC17.38■□□□□ 0.37
CDCA3Q99618 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.38■□□□□ 0.37
CDCA3Q99618 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.38■□□□□ 0.37
CDCA3Q99618 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDCA3Q99618 AC114501.2-201ENST00000439631 535 ntBASIC17.38■□□□□ 0.37
CDCA3Q99618 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDCA3Q99618 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.38■□□□□ 0.37
CDCA3Q99618 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.38■□□□□ 0.37
CDCA3Q99618 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.38■□□□□ 0.37
CDCA3Q99618 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.38■□□□□ 0.37
CDCA3Q99618 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.38■□□□□ 0.37
CDCA3Q99618 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.38■□□□□ 0.37
CDCA3Q99618 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.38■□□□□ 0.37
CDCA3Q99618 AC008494.3-201ENST00000606615 944 ntBASIC17.38■□□□□ 0.37
CDCA3Q99618 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.38■□□□□ 0.37
CDCA3Q99618 TUBB8P12-201ENST00000308911 1335 ntBASIC17.38■□□□□ 0.37
CDCA3Q99618 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDCA3Q99618 TUBB7P-202ENST00000428444 1305 ntBASIC17.38■□□□□ 0.37
CDCA3Q99618 TUBB8P7-204ENST00000567960 1332 ntBASIC17.38■□□□□ 0.37
CDCA3Q99618 AC098818.2-201ENST00000564925 2320 ntBASIC17.38■□□□□ 0.37
CDCA3Q99618 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDCA3Q99618 AC116353.5-201ENST00000638148 1699 ntBASIC17.38■□□□□ 0.37
CDCA3Q99618 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CDCA3Q99618 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.38■□□□□ 0.37
CDCA3Q99618 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.38■□□□□ 0.37
CDCA3Q99618 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CDCA3Q99618 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.38■□□□□ 0.37
CDCA3Q99618 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDCA3Q99618 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDCA3Q99618 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDCA3Q99618 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.37■□□□□ 0.37
CDCA3Q99618 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDCA3Q99618 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDCA3Q99618 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDCA3Q99618 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.37■□□□□ 0.37
CDCA3Q99618 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.37■□□□□ 0.37
CDCA3Q99618 AC009113.1-201ENST00000570267 2443 ntBASIC17.37■□□□□ 0.37
CDCA3Q99618 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.37■□□□□ 0.37
CDCA3Q99618 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.37■□□□□ 0.37
CDCA3Q99618 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDCA3Q99618 MIR1909-201ENST00000411312 80 ntBASIC17.37■□□□□ 0.37
CDCA3Q99618 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.37■□□□□ 0.37
CDCA3Q99618 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.37■□□□□ 0.37
CDCA3Q99618 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.37■□□□□ 0.37
CDCA3Q99618 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.37■□□□□ 0.37
CDCA3Q99618 RAB43P1-201ENST00000561790 589 ntBASIC17.37■□□□□ 0.37
CDCA3Q99618 AC132938.2-201ENST00000579188 680 ntBASIC17.37■□□□□ 0.37
CDCA3Q99618 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.37■□□□□ 0.37
CDCA3Q99618 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.37■□□□□ 0.37
CDCA3Q99618 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.37■□□□□ 0.37
CDCA3Q99618 AL591163.1-201ENST00000641757 987 ntBASIC17.37■□□□□ 0.37
CDCA3Q99618 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDCA3Q99618 SLC7A15P-201ENST00000424028 1363 ntBASIC17.37■□□□□ 0.37
CDCA3Q99618 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.37■□□□□ 0.37
CDCA3Q99618 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDCA3Q99618 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDCA3Q99618 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.36■□□□□ 0.37
CDCA3Q99618 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCA3Q99618 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCA3Q99618 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDCA3Q99618 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCA3Q99618 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDCA3Q99618 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCA3Q99618 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CDCA3Q99618 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCA3Q99618 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.36■□□□□ 0.37
CDCA3Q99618 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCA3Q99618 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.36■□□□□ 0.37
CDCA3Q99618 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCA3Q99618 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.36■□□□□ 0.37
CDCA3Q99618 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.36■□□□□ 0.37
CDCA3Q99618 KRT17P8-201ENST00000540749 863 ntBASIC17.36■□□□□ 0.37
CDCA3Q99618 CHCHD2P3-201ENST00000603038 451 ntBASIC17.36■□□□□ 0.37
CDCA3Q99618 AC013467.2-201ENST00000605472 835 ntBASIC17.36■□□□□ 0.37
CDCA3Q99618 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDCA3Q99618 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.36■□□□□ 0.37
CDCA3Q99618 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CDCA3Q99618 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCA3Q99618 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDCA3Q99618 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.36■□□□□ 0.37
CDCA3Q99618 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDCA3Q99618 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.36■□□□□ 0.37
CDCA3Q99618 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.36■□□□□ 0.37
CDCA3Q99618 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.36■□□□□ 0.37
CDCA3Q99618 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDCA3Q99618 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CDCA3Q99618 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCA3Q99618 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCA3Q99618 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.36■□□□□ 0.37
CDCA3Q99618 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA3Q99618 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA3Q99618 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA3Q99618 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms