Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17■□□□□ 0.31
NDNQ99608 MIR3652-201ENST00000579335 131 ntBASIC17■□□□□ 0.31
NDNQ99608 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17■□□□□ 0.31
NDNQ99608 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
NDNQ99608 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17■□□□□ 0.31
NDNQ99608 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
NDNQ99608 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NDNQ99608 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17■□□□□ 0.31
NDNQ99608 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NDNQ99608 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17■□□□□ 0.31
NDNQ99608 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
NDNQ99608 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NDNQ99608 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17■□□□□ 0.31
NDNQ99608 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NDNQ99608 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NDNQ99608 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
NDNQ99608 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NDNQ99608 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NDNQ99608 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.99■□□□□ 0.31
NDNQ99608 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NDNQ99608 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NDNQ99608 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NDNQ99608 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
NDNQ99608 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NDNQ99608 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NDNQ99608 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
NDNQ99608 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.99■□□□□ 0.31
NDNQ99608 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NDNQ99608 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.99■□□□□ 0.31
NDNQ99608 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.99■□□□□ 0.31
NDNQ99608 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.99■□□□□ 0.31
NDNQ99608 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.99■□□□□ 0.31
NDNQ99608 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.99■□□□□ 0.31
NDNQ99608 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.99■□□□□ 0.31
NDNQ99608 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.99■□□□□ 0.31
NDNQ99608 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
NDNQ99608 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
NDNQ99608 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
NDNQ99608 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NDNQ99608 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
NDNQ99608 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NDNQ99608 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.99■□□□□ 0.31
NDNQ99608 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NDNQ99608 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
NDNQ99608 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NDNQ99608 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NDNQ99608 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NDNQ99608 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NDNQ99608 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.98■□□□□ 0.31
NDNQ99608 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NDNQ99608 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NDNQ99608 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.98■□□□□ 0.31
NDNQ99608 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NDNQ99608 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
NDNQ99608 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NDNQ99608 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NDNQ99608 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
NDNQ99608 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NDNQ99608 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NDNQ99608 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NDNQ99608 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NDNQ99608 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.98■□□□□ 0.31
NDNQ99608 AC106795.1-205ENST00000512851 1056 ntBASIC16.98■□□□□ 0.31
NDNQ99608 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.98■□□□□ 0.31
NDNQ99608 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NDNQ99608 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.98■□□□□ 0.31
NDNQ99608 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.98■□□□□ 0.31
NDNQ99608 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
NDNQ99608 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NDNQ99608 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.98■□□□□ 0.31
NDNQ99608 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NDNQ99608 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
NDNQ99608 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NDNQ99608 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
NDNQ99608 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NDNQ99608 FER1L4-210ENST00000615531 5998 ntBASIC16.98■□□□□ 0.31
NDNQ99608 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NDNQ99608 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.98■□□□□ 0.31
NDNQ99608 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
NDNQ99608 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NDNQ99608 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NDNQ99608 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NDNQ99608 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NDNQ99608 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NDNQ99608 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NDNQ99608 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NDNQ99608 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
NDNQ99608 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NDNQ99608 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
NDNQ99608 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.97■□□□□ 0.31
NDNQ99608 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.97■□□□□ 0.31
NDNQ99608 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NDNQ99608 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.97■□□□□ 0.31
NDNQ99608 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NDNQ99608 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NDNQ99608 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NDNQ99608 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
NDNQ99608 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NDNQ99608 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
NDNQ99608 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms