Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
NOTCH4Q99466 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NOTCH4Q99466 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.17■□□□□ 0.34
NOTCH4Q99466 CR383656.12-201ENST00000549567 513 ntBASIC17.17■□□□□ 0.34
NOTCH4Q99466 AC061975.2-201ENST00000581722 295 ntBASIC17.17■□□□□ 0.34
NOTCH4Q99466 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.17■□□□□ 0.34
NOTCH4Q99466 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NOTCH4Q99466 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.17■□□□□ 0.34
NOTCH4Q99466 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.17■□□□□ 0.34
NOTCH4Q99466 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.17■□□□□ 0.34
NOTCH4Q99466 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.17■□□□□ 0.34
NOTCH4Q99466 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.17■□□□□ 0.34
NOTCH4Q99466 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.17■□□□□ 0.34
NOTCH4Q99466 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
NOTCH4Q99466 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
NOTCH4Q99466 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
NOTCH4Q99466 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.16■□□□□ 0.34
NOTCH4Q99466 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NOTCH4Q99466 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.16■□□□□ 0.34
NOTCH4Q99466 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.16■□□□□ 0.34
NOTCH4Q99466 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.16■□□□□ 0.34
NOTCH4Q99466 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NOTCH4Q99466 AC093724.1-201ENST00000448659 1027 ntBASIC17.16■□□□□ 0.34
NOTCH4Q99466 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.16■□□□□ 0.34
NOTCH4Q99466 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.16■□□□□ 0.34
NOTCH4Q99466 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.16■□□□□ 0.34
NOTCH4Q99466 AC104794.3-201ENST00000566840 1248 ntBASIC17.16■□□□□ 0.34
NOTCH4Q99466 AC027307.3-201ENST00000594262 1100 ntBASIC17.16■□□□□ 0.34
NOTCH4Q99466 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.16■□□□□ 0.34
NOTCH4Q99466 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NOTCH4Q99466 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.16■□□□□ 0.34
NOTCH4Q99466 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
NOTCH4Q99466 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NOTCH4Q99466 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.16■□□□□ 0.34
NOTCH4Q99466 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NOTCH4Q99466 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.16■□□□□ 0.34
NOTCH4Q99466 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.16■□□□□ 0.34
NOTCH4Q99466 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NOTCH4Q99466 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
NOTCH4Q99466 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NOTCH4Q99466 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NOTCH4Q99466 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NOTCH4Q99466 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
NOTCH4Q99466 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NOTCH4Q99466 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.16■□□□□ 0.34
NOTCH4Q99466 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NOTCH4Q99466 AC087499.5-201ENST00000452760 1342 ntBASIC17.16■□□□□ 0.34
NOTCH4Q99466 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.16■□□□□ 0.34
NOTCH4Q99466 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.16■□□□□ 0.34
NOTCH4Q99466 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.16■□□□□ 0.34
NOTCH4Q99466 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.16■□□□□ 0.34
NOTCH4Q99466 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.16■□□□□ 0.34
NOTCH4Q99466 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NOTCH4Q99466 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.16■□□□□ 0.34
NOTCH4Q99466 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.16■□□□□ 0.34
NOTCH4Q99466 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NOTCH4Q99466 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
NOTCH4Q99466 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
NOTCH4Q99466 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
NOTCH4Q99466 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NOTCH4Q99466 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NOTCH4Q99466 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NOTCH4Q99466 CU639417.3-201ENST00000624240 1404 ntBASIC17.15■□□□□ 0.34
NOTCH4Q99466 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.15■□□□□ 0.34
NOTCH4Q99466 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
NOTCH4Q99466 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NOTCH4Q99466 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.15■□□□□ 0.34
NOTCH4Q99466 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.15■□□□□ 0.34
NOTCH4Q99466 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.15■□□□□ 0.34
NOTCH4Q99466 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.15■□□□□ 0.34
NOTCH4Q99466 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.15■□□□□ 0.34
NOTCH4Q99466 AC105021.1-202ENST00000570572 669 ntBASIC17.15■□□□□ 0.34
NOTCH4Q99466 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.15■□□□□ 0.34
NOTCH4Q99466 AL358472.5-202ENST00000641448 1267 ntBASIC17.15■□□□□ 0.34
NOTCH4Q99466 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
NOTCH4Q99466 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NOTCH4Q99466 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NOTCH4Q99466 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
NOTCH4Q99466 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.15■□□□□ 0.34
NOTCH4Q99466 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.15■□□□□ 0.34
NOTCH4Q99466 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NOTCH4Q99466 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NOTCH4Q99466 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NOTCH4Q99466 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.15■□□□□ 0.34
NOTCH4Q99466 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NOTCH4Q99466 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NOTCH4Q99466 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
NOTCH4Q99466 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.15■□□□□ 0.34
NOTCH4Q99466 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.34
NOTCH4Q99466 DGCR5-201ENST00000399539 862 ntBASIC17.14■□□□□ 0.34
NOTCH4Q99466 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
NOTCH4Q99466 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.14■□□□□ 0.34
NOTCH4Q99466 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
NOTCH4Q99466 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.14■□□□□ 0.34
NOTCH4Q99466 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.14■□□□□ 0.33
NOTCH4Q99466 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
NOTCH4Q99466 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NOTCH4Q99466 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.14■□□□□ 0.33
NOTCH4Q99466 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.14■□□□□ 0.33
NOTCH4Q99466 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms