Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.04■□□□□ 0.16
BBS4Q96RK4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BBS4Q96RK4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BBS4Q96RK4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.04■□□□□ 0.16
BBS4Q96RK4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
BBS4Q96RK4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BBS4Q96RK4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.04■□□□□ 0.16
BBS4Q96RK4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
BBS4Q96RK4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.04■□□□□ 0.16
BBS4Q96RK4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BBS4Q96RK4 RNF216P1-203ENST00000404404 2427 ntBASIC16.04■□□□□ 0.16
BBS4Q96RK4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BBS4Q96RK4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
BBS4Q96RK4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
BBS4Q96RK4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BBS4Q96RK4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.04■□□□□ 0.16
BBS4Q96RK4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
BBS4Q96RK4 UNC93B7-201ENST00000509439 705 ntBASIC16.04■□□□□ 0.16
BBS4Q96RK4 AC073648.2-201ENST00000510116 352 ntBASIC16.04■□□□□ 0.16
BBS4Q96RK4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.04■□□□□ 0.16
BBS4Q96RK4 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.04■□□□□ 0.16
BBS4Q96RK4 AC025062.2-201ENST00000605477 670 ntBASIC16.04■□□□□ 0.16
BBS4Q96RK4 AC004706.3-202ENST00000621574 984 ntBASIC16.04■□□□□ 0.16
BBS4Q96RK4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BBS4Q96RK4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BBS4Q96RK4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.04■□□□□ 0.16
BBS4Q96RK4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.04■□□□□ 0.16
BBS4Q96RK4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BBS4Q96RK4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
BBS4Q96RK4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.04■□□□□ 0.16
BBS4Q96RK4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
BBS4Q96RK4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
BBS4Q96RK4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
BBS4Q96RK4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BBS4Q96RK4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BBS4Q96RK4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BBS4Q96RK4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BBS4Q96RK4 FLJ38576-201ENST00000623820 2459 ntBASIC16.04■□□□□ 0.16
BBS4Q96RK4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
BBS4Q96RK4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BBS4Q96RK4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
BBS4Q96RK4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BBS4Q96RK4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BBS4Q96RK4 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
BBS4Q96RK4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BBS4Q96RK4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BBS4Q96RK4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BBS4Q96RK4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BBS4Q96RK4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BBS4Q96RK4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.03■□□□□ 0.16
BBS4Q96RK4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
BBS4Q96RK4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BBS4Q96RK4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BBS4Q96RK4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.03■□□□□ 0.16
BBS4Q96RK4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.03■□□□□ 0.16
BBS4Q96RK4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
BBS4Q96RK4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.03■□□□□ 0.16
BBS4Q96RK4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.03■□□□□ 0.16
BBS4Q96RK4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BBS4Q96RK4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.03■□□□□ 0.16
BBS4Q96RK4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BBS4Q96RK4 LAGE3P1-201ENST00000425356 484 ntBASIC16.03■□□□□ 0.16
BBS4Q96RK4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.03■□□□□ 0.16
BBS4Q96RK4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.03■□□□□ 0.16
BBS4Q96RK4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.03■□□□□ 0.16
BBS4Q96RK4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.03■□□□□ 0.16
BBS4Q96RK4 AC006557.2-201ENST00000592985 1240 ntBASIC16.03■□□□□ 0.16
BBS4Q96RK4 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
BBS4Q96RK4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
BBS4Q96RK4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.03■□□□□ 0.16
BBS4Q96RK4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
BBS4Q96RK4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BBS4Q96RK4 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.03■□□□□ 0.16
BBS4Q96RK4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
BBS4Q96RK4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
BBS4Q96RK4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.03■□□□□ 0.16
BBS4Q96RK4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BBS4Q96RK4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
BBS4Q96RK4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.02■□□□□ 0.16
BBS4Q96RK4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.02■□□□□ 0.16
BBS4Q96RK4 AC078925.2-201ENST00000624013 1973 ntBASIC16.02■□□□□ 0.16
BBS4Q96RK4 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
BBS4Q96RK4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BBS4Q96RK4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.02■□□□□ 0.16
BBS4Q96RK4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BBS4Q96RK4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BBS4Q96RK4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
BBS4Q96RK4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BBS4Q96RK4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BBS4Q96RK4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BBS4Q96RK4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BBS4Q96RK4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
BBS4Q96RK4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BBS4Q96RK4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.02■□□□□ 0.16
BBS4Q96RK4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.02■□□□□ 0.16
BBS4Q96RK4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.02■□□□□ 0.16
BBS4Q96RK4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.02■□□□□ 0.16
BBS4Q96RK4 EMBP1-201ENST00000458200 901 ntBASIC16.02■□□□□ 0.16
BBS4Q96RK4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.02■□□□□ 0.16
BBS4Q96RK4 OR7E14P-202ENST00000530490 1290 ntBASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms