Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP1S3Q96PC3 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 AC132872.4-202ENST00000622924 2756 ntBASIC12.84□□□□□ -0.35
AP1S3Q96PC3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 KRT18P65-201ENST00000439811 1286 ntBASIC12.84□□□□□ -0.35
AP1S3Q96PC3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 AC113404.2-201ENST00000507884 177 ntBASIC12.84□□□□□ -0.35
AP1S3Q96PC3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 AL512604.3-201ENST00000569583 964 ntBASIC12.84□□□□□ -0.35
AP1S3Q96PC3 MIR4651-201ENST00000582622 73 ntBASIC12.84□□□□□ -0.35
AP1S3Q96PC3 AC233702.5-201ENST00000584107 538 ntBASIC12.84□□□□□ -0.35
AP1S3Q96PC3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
AP1S3Q96PC3 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
AP1S3Q96PC3 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
AP1S3Q96PC3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
AP1S3Q96PC3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
AP1S3Q96PC3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
AP1S3Q96PC3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
AP1S3Q96PC3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
AP1S3Q96PC3 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
AP1S3Q96PC3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
AP1S3Q96PC3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC12.83□□□□□ -0.35
AP1S3Q96PC3 BX276092.7-203ENST00000637198 1536 ntBASIC12.83□□□□□ -0.35
AP1S3Q96PC3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP1S3Q96PC3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP1S3Q96PC3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP1S3Q96PC3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP1S3Q96PC3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC12.83□□□□□ -0.36
AP1S3Q96PC3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC12.83□□□□□ -0.36
AP1S3Q96PC3 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
AP1S3Q96PC3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC12.83□□□□□ -0.36
AP1S3Q96PC3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP1S3Q96PC3 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.83□□□□□ -0.36
AP1S3Q96PC3 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP1S3Q96PC3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP1S3Q96PC3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC12.83□□□□□ -0.36
AP1S3Q96PC3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC12.83□□□□□ -0.36
AP1S3Q96PC3 AC007663.1-201ENST00000438948 1240 ntBASIC12.83□□□□□ -0.36
AP1S3Q96PC3 UBE2SP1-201ENST00000450587 669 ntBASIC12.83□□□□□ -0.36
AP1S3Q96PC3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC12.83□□□□□ -0.36
AP1S3Q96PC3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC12.83□□□□□ -0.36
AP1S3Q96PC3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC12.83□□□□□ -0.36
AP1S3Q96PC3 AP003071.4-201ENST00000562276 1284 ntBASIC12.83□□□□□ -0.36
AP1S3Q96PC3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC12.83□□□□□ -0.36
AP1S3Q96PC3 AC024243.1-201ENST00000609234 778 ntBASIC12.83□□□□□ -0.36
AP1S3Q96PC3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
AP1S3Q96PC3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
AP1S3Q96PC3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
AP1S3Q96PC3 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP1S3Q96PC3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP1S3Q96PC3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP1S3Q96PC3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
AP1S3Q96PC3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
AP1S3Q96PC3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
AP1S3Q96PC3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms