Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTP4Q96DX8 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.2■□□□□ 0.34
RTP4Q96DX8 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTP4Q96DX8 AC073621.1-201ENST00000392730 636 ntBASIC17.2■□□□□ 0.34
RTP4Q96DX8 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RTP4Q96DX8 RNA5SP419-201ENST00000515908 135 ntBASIC17.2■□□□□ 0.34
RTP4Q96DX8 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTP4Q96DX8 AC023511.2-201ENST00000618803 211 ntBASIC17.2■□□□□ 0.34
RTP4Q96DX8 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.2■□□□□ 0.34
RTP4Q96DX8 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RTP4Q96DX8 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTP4Q96DX8 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RTP4Q96DX8 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTP4Q96DX8 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RTP4Q96DX8 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTP4Q96DX8 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RTP4Q96DX8 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTP4Q96DX8 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RTP4Q96DX8 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RTP4Q96DX8 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RTP4Q96DX8 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.2■□□□□ 0.34
RTP4Q96DX8 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.2■□□□□ 0.34
RTP4Q96DX8 AL662844.4-201ENST00000606367 2838 ntBASIC17.2■□□□□ 0.34
RTP4Q96DX8 SLC22A20-204ENST00000530038 1673 ntBASIC17.2■□□□□ 0.34
RTP4Q96DX8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.2■□□□□ 0.34
RTP4Q96DX8 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.2■□□□□ 0.34
RTP4Q96DX8 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.2■□□□□ 0.34
RTP4Q96DX8 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTP4Q96DX8 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTP4Q96DX8 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.19■□□□□ 0.34
RTP4Q96DX8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTP4Q96DX8 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.19■□□□□ 0.34
RTP4Q96DX8 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RTP4Q96DX8 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.19■□□□□ 0.34
RTP4Q96DX8 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
RTP4Q96DX8 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RTP4Q96DX8 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTP4Q96DX8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTP4Q96DX8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.19■□□□□ 0.34
RTP4Q96DX8 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RTP4Q96DX8 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTP4Q96DX8 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.19■□□□□ 0.34
RTP4Q96DX8 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.19■□□□□ 0.34
RTP4Q96DX8 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RTP4Q96DX8 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RTP4Q96DX8 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTP4Q96DX8 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.19■□□□□ 0.34
RTP4Q96DX8 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.19■□□□□ 0.34
RTP4Q96DX8 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.19■□□□□ 0.34
RTP4Q96DX8 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RTP4Q96DX8 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RTP4Q96DX8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTP4Q96DX8 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RTP4Q96DX8 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.19■□□□□ 0.34
RTP4Q96DX8 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.19■□□□□ 0.34
RTP4Q96DX8 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RTP4Q96DX8 AL671710.1-201ENST00000610245 2349 ntBASIC17.19■□□□□ 0.34
RTP4Q96DX8 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTP4Q96DX8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RTP4Q96DX8 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.19■□□□□ 0.34
RTP4Q96DX8 GGT4P-201ENST00000623672 1708 ntBASIC17.18■□□□□ 0.34
RTP4Q96DX8 AC131009.4-201ENST00000624048 1740 ntBASIC17.18■□□□□ 0.34
RTP4Q96DX8 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.18■□□□□ 0.34
RTP4Q96DX8 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RTP4Q96DX8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RTP4Q96DX8 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTP4Q96DX8 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.18■□□□□ 0.34
RTP4Q96DX8 AC092364.2-201ENST00000596710 2692 ntBASIC17.18■□□□□ 0.34
RTP4Q96DX8 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RTP4Q96DX8 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RTP4Q96DX8 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTP4Q96DX8 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RTP4Q96DX8 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RTP4Q96DX8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
RTP4Q96DX8 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTP4Q96DX8 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RTP4Q96DX8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.18■□□□□ 0.34
RTP4Q96DX8 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.18■□□□□ 0.34
RTP4Q96DX8 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTP4Q96DX8 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTP4Q96DX8 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTP4Q96DX8 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTP4Q96DX8 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.18■□□□□ 0.34
RTP4Q96DX8 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTP4Q96DX8 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTP4Q96DX8 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTP4Q96DX8 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTP4Q96DX8 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.18■□□□□ 0.34
RTP4Q96DX8 KRT18P67-201ENST00000432816 1264 ntBASIC17.18■□□□□ 0.34
RTP4Q96DX8 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.18■□□□□ 0.34
RTP4Q96DX8 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.18■□□□□ 0.34
RTP4Q96DX8 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.18■□□□□ 0.34
RTP4Q96DX8 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RTP4Q96DX8 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.18■□□□□ 0.34
RTP4Q96DX8 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.18■□□□□ 0.34
RTP4Q96DX8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.18■□□□□ 0.34
RTP4Q96DX8 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.18■□□□□ 0.34
RTP4Q96DX8 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.18■□□□□ 0.34
RTP4Q96DX8 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTP4Q96DX8 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms