Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.12■□□□□ 0.49
TRIM43Q96BQ3 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM43Q96BQ3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM43Q96BQ3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.12■□□□□ 0.49
TRIM43Q96BQ3 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM43Q96BQ3 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.12■□□□□ 0.49
TRIM43Q96BQ3 AC098850.1-201ENST00000419919 790 ntBASIC18.12■□□□□ 0.49
TRIM43Q96BQ3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM43Q96BQ3 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.12■□□□□ 0.49
TRIM43Q96BQ3 AC234783.1-201ENST00000441761 496 ntBASIC18.12■□□□□ 0.49
TRIM43Q96BQ3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM43Q96BQ3 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC18.12■□□□□ 0.49
TRIM43Q96BQ3 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.12■□□□□ 0.49
TRIM43Q96BQ3 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.12■□□□□ 0.49
TRIM43Q96BQ3 AC023310.3-201ENST00000557027 670 ntBASIC18.12■□□□□ 0.49
TRIM43Q96BQ3 AC100756.1-201ENST00000562736 682 ntBASIC18.12■□□□□ 0.49
TRIM43Q96BQ3 AC138749.3-201ENST00000567691 622 ntBASIC18.12■□□□□ 0.49
TRIM43Q96BQ3 AC116165.1-201ENST00000611806 668 ntBASIC18.12■□□□□ 0.49
TRIM43Q96BQ3 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM43Q96BQ3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM43Q96BQ3 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM43Q96BQ3 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM43Q96BQ3 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM43Q96BQ3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TRIM43Q96BQ3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM43Q96BQ3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM43Q96BQ3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM43Q96BQ3 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 BNIP3P42-201ENST00000454982 569 ntBASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 CROCCP4-201ENST00000457096 498 ntBASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 TPRX2P-201ENST00000535362 881 ntBASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 BNIP3P29-201ENST00000598302 571 ntBASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 AC011447.5-201ENST00000616168 564 ntBASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 AC093503.3-201ENST00000624917 2352 ntBASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM43Q96BQ3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 AC090164.3-201ENST00000610780 2143 ntBASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 ANKRD19P-201ENST00000338192 862 ntBASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 SLC25A1P3-201ENST00000395415 828 ntBASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 AL589987.1-201ENST00000453380 819 ntBASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 AC123567.1-201ENST00000548294 1261 ntBASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 GPR182-203ENST00000622922 591 ntBASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 AC004461.2-201ENST00000629517 803 ntBASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 AL109936.8-201ENST00000641772 604 ntBASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRIM43Q96BQ3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms