Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CNOT9Q92600 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CNOT9Q92600 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.6■□□□□ 0.09
CNOT9Q92600 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.6■□□□□ 0.09
CNOT9Q92600 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.6■□□□□ 0.09
CNOT9Q92600 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.6■□□□□ 0.09
CNOT9Q92600 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.6■□□□□ 0.09
CNOT9Q92600 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.6■□□□□ 0.09
CNOT9Q92600 EMBP1-201ENST00000458200 901 ntBASIC15.6■□□□□ 0.09
CNOT9Q92600 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CNOT9Q92600 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.6■□□□□ 0.09
CNOT9Q92600 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.6■□□□□ 0.09
CNOT9Q92600 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.6■□□□□ 0.09
CNOT9Q92600 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.6■□□□□ 0.09
CNOT9Q92600 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.6■□□□□ 0.09
CNOT9Q92600 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.6■□□□□ 0.09
CNOT9Q92600 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.6■□□□□ 0.09
CNOT9Q92600 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CNOT9Q92600 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.6■□□□□ 0.09
CNOT9Q92600 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.6■□□□□ 0.09
CNOT9Q92600 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CNOT9Q92600 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CNOT9Q92600 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CNOT9Q92600 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.6■□□□□ 0.09
CNOT9Q92600 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CNOT9Q92600 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CNOT9Q92600 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CNOT9Q92600 AL021920.2-201ENST00000624828 1351 ntBASIC15.6■□□□□ 0.09
CNOT9Q92600 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CNOT9Q92600 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CNOT9Q92600 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CNOT9Q92600 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CNOT9Q92600 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CNOT9Q92600 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CNOT9Q92600 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CNOT9Q92600 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CNOT9Q92600 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CNOT9Q92600 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CNOT9Q92600 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CNOT9Q92600 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CNOT9Q92600 AC006504.4-201ENST00000592118 1568 ntBASIC15.59■□□□□ 0.09
CNOT9Q92600 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CNOT9Q92600 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CNOT9Q92600 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CNOT9Q92600 PTCHD3P3-201ENST00000403073 906 ntBASIC15.59■□□□□ 0.09
CNOT9Q92600 ELK2BP-201ENST00000415014 1224 ntBASIC15.59■□□□□ 0.09
CNOT9Q92600 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.59■□□□□ 0.09
CNOT9Q92600 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.59■□□□□ 0.09
CNOT9Q92600 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.59■□□□□ 0.09
CNOT9Q92600 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.59■□□□□ 0.09
CNOT9Q92600 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CNOT9Q92600 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.59■□□□□ 0.09
CNOT9Q92600 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CNOT9Q92600 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.59■□□□□ 0.09
CNOT9Q92600 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CNOT9Q92600 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CNOT9Q92600 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.59■□□□□ 0.09
CNOT9Q92600 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CNOT9Q92600 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CNOT9Q92600 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CNOT9Q92600 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.59■□□□□ 0.09
CNOT9Q92600 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
CNOT9Q92600 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CNOT9Q92600 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CNOT9Q92600 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CNOT9Q92600 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.59■□□□□ 0.09
CNOT9Q92600 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CNOT9Q92600 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CNOT9Q92600 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.58■□□□□ 0.09
CNOT9Q92600 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CNOT9Q92600 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
CNOT9Q92600 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
CNOT9Q92600 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
CNOT9Q92600 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.09
CNOT9Q92600 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CNOT9Q92600 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CNOT9Q92600 AL603756.1-201ENST00000606511 2163 ntBASIC15.58■□□□□ 0.08
CNOT9Q92600 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
CNOT9Q92600 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CNOT9Q92600 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CNOT9Q92600 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CNOT9Q92600 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.58■□□□□ 0.08
CNOT9Q92600 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CNOT9Q92600 RPS2P1-201ENST00000434010 821 ntBASIC15.58■□□□□ 0.08
CNOT9Q92600 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.58■□□□□ 0.08
CNOT9Q92600 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.58■□□□□ 0.08
CNOT9Q92600 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.58■□□□□ 0.08
CNOT9Q92600 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.58■□□□□ 0.08
CNOT9Q92600 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CNOT9Q92600 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.58■□□□□ 0.08
CNOT9Q92600 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CNOT9Q92600 TP73-AS1-207ENST00000624167 988 ntBASIC15.58■□□□□ 0.08
CNOT9Q92600 AC107918.4-202ENST00000641623 219 ntBASIC15.58■□□□□ 0.08
CNOT9Q92600 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
CNOT9Q92600 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CNOT9Q92600 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CNOT9Q92600 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CNOT9Q92600 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CNOT9Q92600 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CNOT9Q92600 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms